Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 1536 a.a., glutamate synthase (ferredoxin) from Synechococcus elongatus PCC 7942

 Score =  199 bits (505), Expect = 8e-55
 Identities = 125/334 (37%), Positives = 169/334 (50%), Gaps = 27/334 (8%)

Query: 181  GHMSYGALSLNAHKAMAKAVKECGTFMGTGEGG-----------------------LHRD 217
            G MS GALS  AH+ +A A+   G    +GEGG                       LH  
Sbjct: 892  GGMSLGALSREAHETLAIAMNRLGGKSNSGEGGEDPVRYKVLGDVDAEGNSPTLPHLHGL 951

Query: 218  LYG-YSDNVITQVASGRFGVNSEYLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTR 276
              G  + + I Q+ASGRFGV  EYL     +EIK+ QGAKPG GG LPG+KVS  ++  R
Sbjct: 952  RNGDTASSAIKQIASGRFGVTPEYLMSADQLEIKVSQGAKPGEGGQLPGKKVSPYIAFLR 1011

Query: 277  MIPQGSDAISPAPHHDIYSIEDLAQLIRSLKEATRWKMPVFVKISAVHNVSAIANGIATS 336
                G   ISP PHHDIYSIEDLAQLI  L +    K  V VK+ A   +  +A G+A +
Sbjct: 1012 NSKAGVSLISPPPHHDIYSIEDLAQLIFDLHQINP-KAQVSVKLVAEIGIGTVAAGVAKA 1070

Query: 337  DADAVVIDGFKGGTGAAPKVFRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNS 396
            +AD + + G  GGTGA+P     + G P E+ +  V   L E   R ++ +   GG++  
Sbjct: 1071 NADIIQVSGHDGGTGASPLSSIKHAGGPWELGLTEVHRVLMENQLRQRVLLRVDGGLKTG 1130

Query: 397  ADVFKSIALGADAVYIGTAAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARR 456
             DV  +  +GA+    G+ AM+A GC +   C+T  C  G+ATQ+ +L KR         
Sbjct: 1131 WDVVMAALMGAEEFGFGSIAMIAEGCIMARVCHTNNCPVGVATQQEQLRKRF--TGIPEH 1188

Query: 457  VANLIHAWTHEIQELLGAAGINSIESLRGNRDRL 490
            V N       E++ +L   G  S+  L G  D L
Sbjct: 1189 VVNFFILIAEEVRSILAKLGYRSLTELTGRTDLL 1222



 Score = 28.1 bits (61), Expect = 0.002
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 119 QVTNPSIDPLREP--MELRTYVGKKPEKLE 146
           QVTNP+IDPLRE   M L   +G +   L+
Sbjct: 528 QVTNPAIDPLRESLVMSLSMTLGARDNLLQ 557