Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 1574 a.a., glutamate synthase from Sinorhizobium meliloti 1021

 Score =  219 bits (558), Expect = 6e-61
 Identities = 128/332 (38%), Positives = 175/332 (52%), Gaps = 11/332 (3%)

Query: 167  KIAPNLKLDTPIMIGHMSYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDLY------- 219
            ++ P  ++      G MS+G++S  AH  +A A+   G    TGEGG   D Y       
Sbjct: 906  EVEPAAEIVKRFSTGAMSFGSISREAHTTLAVAMNRIGGKSNTGEGGEESDRYLPLPDGS 965

Query: 220  -GYSDNVITQVASGRFGVNSEYLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMI 278
                 + I Q+ASGRFGV +EYL     ++IK+ QGAKPG GG LPG KV A V+ TR  
Sbjct: 966  TNPERSAIKQIASGRFGVTTEYLVNADVLQIKVAQGAKPGEGGQLPGHKVDATVAKTRHS 1025

Query: 279  PQGSDAISPAPHHDIYSIEDLAQLIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDA 338
              G   ISP PHHDIYSIEDLAQLI  LK     +  V VK+ +   V  +A G+A + A
Sbjct: 1026 TPGVGLISPPPHHDIYSIEDLAQLIYDLKNVNP-EADVSVKLVSEVGVGTVAAGVAKARA 1084

Query: 339  DAVVIDGFKGGTGAAPKVFRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSAD 398
            D + I GF GGTGA+P     + G P E+ +A     L   G R +I++   GG++   D
Sbjct: 1085 DHITIAGFDGGTGASPLTSLKHAGSPWEIGLAETQQTLVLNGLRSRIALQVDGGLKTGRD 1144

Query: 399  VFKSIALGADAVYIGTAAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVA 458
            V     LGAD     TA ++A GC +  +C+   C  G+ATQ P L KR +       V 
Sbjct: 1145 VVIGALLGADEFGFATAPLIAAGCIMMRKCHLNTCPVGVATQDPVLRKRFK--GTPEHVV 1202

Query: 459  NLIHAWTHEIQELLGAAGINSIESLRGNRDRL 490
            N       E++E+L + G   ++ + G+ D L
Sbjct: 1203 NYFFFVAEEVREILASLGARRLDDIIGSSDLL 1234



 Score = 35.8 bits (81), Expect = 1e-05
 Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 19/132 (14%)

Query: 60  RDAITVTLNQSCGREHPVWTPEVKQDVVTQAKSGCILLSGMGNAKEYPIYFDKIVL---- 115
           RD   +   Q+ G  H     + K  +   A +G   +  MG         DK  L    
Sbjct: 492 RDVSLIDRQQAFGYTHE----DTKLLMSPMATTGQEAIGSMGTDTPISAMSDKPKLLYTY 547

Query: 116 ---DACQVTNPSIDPLREP--MELRTYVGKKPEKLEFDYVEDEIDGKKVKKAKLKTKIAP 170
              +  QVTNP IDP+RE   M L +++G +P  L+ + +         K+ +++  I  
Sbjct: 548 FKQNFAQVTNPPIDPIREELVMSLVSFIGPRPNILDHEGM------AHAKRLEVRQPILT 601

Query: 171 NLKLDTPIMIGH 182
           N  L+    IGH
Sbjct: 602 NGDLEKIRSIGH 613



 Score = 27.7 bits (60), Expect = 0.003
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%)

Query: 338 ADAVVIDGFKGGTGAAPKVFRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSA 397
           A+A V  G+     +  ++  D V IP  +A AAV   L  +G R  + ++   G     
Sbjct: 647 AEAAVKGGYNIIVLSDRQIGPDRVAIPALLATAAVHHHLIRKGLRTSVGLVVESGEPREI 706

Query: 398 DVFKSIA-LGADAV--YIGTAAMVAM 420
             F  +A  GA+A+  Y+    +V M
Sbjct: 707 HHFCLLAGYGAEAINPYLAFDTLVDM 732