Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 1483 a.a., glutamate synthase subunit alpha (RefSeq) from Shewanella amazonensis SB2B

 Score =  220 bits (561), Expect = 2e-61
 Identities = 127/309 (41%), Positives = 168/309 (54%), Gaps = 3/309 (0%)

Query: 183  MSYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDLYGYSDN-VITQVASGRFGVNSEYL 241
            MS GALS  AH+A+A A+   G    +GEGG     +G   N  I Q+ASGRFGV + YL
Sbjct: 863  MSIGALSPEAHEALAIAMNRLGGRSNSGEGGEDPRRFGTEKNSAIKQIASGRFGVTAHYL 922

Query: 242  NKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAISPAPHHDIYSIEDLAQ 301
                 ++IK+ QGAKPG GG LPG KVS E++  R    G   ISP PHHDIYSIEDLAQ
Sbjct: 923  INAEVLQIKVAQGAKPGEGGQLPGHKVSVEIAGLRYARPGVTLISPPPHHDIYSIEDLAQ 982

Query: 302  LIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDADAVVIDGFKGGTGAAPKVFRDNV 361
            LI  LK+    K  + VK+ +   +  IA G+A + AD + + G+ GGTGA+P       
Sbjct: 983  LIFDLKQINP-KALISVKLVSEPGIGTIATGVAKAYADMITVSGYDGGTGASPLTSVKYA 1041

Query: 362  GIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADVFKSIALGADAVYIGTAAMVAMG 421
            G P E+ +A V   L + G RHKI +   GG++   DV K+  LGA++   GT  M+A+G
Sbjct: 1042 GSPWELGLAEVHQALVDNGLRHKIRLQVDGGLKTGTDVIKAALLGAESFGFGTVPMIALG 1101

Query: 422  CTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVANLIHAWTHEIQELLGAAGINSIE 481
            C     C+   CA G+ATQ   L +         RV         E++E +   G+   E
Sbjct: 1102 CKYLRICHLNNCATGVATQDKNL-RDKHFHGLPERVMTYFEFVAEEVREWMARLGVAKFE 1160

Query: 482  SLRGNRDRL 490
             L G  D L
Sbjct: 1161 DLVGRSDWL 1169



 Score = 30.4 bits (67), Expect = 5e-04
 Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 2/25 (8%)

Query: 119 QVTNPSIDPLREP--MELRTYVGKK 141
           QVTNP IDPLRE   M L T VG++
Sbjct: 513 QVTNPPIDPLREKHVMSLATCVGRE 537