Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 1524 a.a., Glutamate synthase (ferredoxin) (NCBI) from Rhodospirillum rubrum S1H

 Score =  228 bits (582), Expect = 9e-64
 Identities = 134/332 (40%), Positives = 191/332 (57%), Gaps = 14/332 (4%)

Query: 183  MSYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDLYGYSDN------VITQVASGRFGV 236
            MS GALS  AH  +  A+   G    +GEGG  R+ Y  + N       I QVASGRFGV
Sbjct: 902  MSLGALSPEAHGTLNIAMNRIGAKSDSGEGGEVRERYKPAANGDNANSAIKQVASGRFGV 961

Query: 237  NSEYLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAISPAPHHDIYSI 296
             +EYLN+   IEIK+ QGAKPG GG LPG KV+  ++  R    G   ISP PHHDIYSI
Sbjct: 962  TAEYLNQCREIEIKVAQGAKPGEGGQLPGFKVTEMIAKLRHSTPGVMLISPPPHHDIYSI 1021

Query: 297  EDLAQLIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDADAVVIDGFKGGTGAAPKV 356
            EDLAQLI  LK+    +  V VK+ +   +  IA G+A ++AD ++I G  GGTGA+P+ 
Sbjct: 1022 EDLAQLIYDLKQINP-RAKVCVKLVSRSGIGTIAAGVAKANADVILISGHSGGTGASPQT 1080

Query: 357  FRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADVFKSIALGADAVYIGTAA 416
               + G+P E+ +A V   L     RH++++   GGI+   DV  +  LGA+   IGT +
Sbjct: 1081 SIKHAGLPWEIGLAEVHQVLTLNRLRHRVTLRTDGGIKCGRDVVIAAMLGAEEYGIGTTS 1140

Query: 417  MVAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVANLIHAWTHEIQELLGAAG 476
            +VAMGC +  +C++  C  G+ TQ  +L  R +    A +V NL      E++E+L + G
Sbjct: 1141 LVAMGCIMVRQCHSNTCPVGVCTQDDDL--RAKFTGTAEKVVNLFSFMAEEVKEILASLG 1198

Query: 477  INSIESLRGNRDRLRGVG-----LSEIELNTL 503
            + S++ + G  D L+ V      L +++LN +
Sbjct: 1199 MRSLDEVVGRTDLLQQVSRGADHLDDLDLNPI 1230



 Score = 26.9 bits (58), Expect = 0.005
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 119 QVTNPSIDPLREP--MELRTYVGKKPEKLEFD 148
           QVTNP ID LRE   M L+T +G     L+ D
Sbjct: 547 QVTNPPIDALRETRVMSLKTRLGNLGNILDED 578