Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 516 a.a., ferredoxin-dependent glutamate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  205 bits (521), Expect = 4e-57
 Identities = 115/310 (37%), Positives = 179/310 (57%), Gaps = 2/310 (0%)

Query: 172 LKLDTPIMIGHMSYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDLYGYSDNVITQVAS 231
           L+L  P+++  MS+GALS  A  A+AK  +  GT + +GEGG+  +    +     ++AS
Sbjct: 181 LRLKIPLLVSDMSFGALSEEAKVALAKGAELAGTGICSGEGGMLPEEQAANSRYFYELAS 240

Query: 232 GRFGVNSEYLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAISPAPHH 291
            +FG     + K  A   K GQGAK G GGHLPG K   +++  R IP G DAISP    
Sbjct: 241 AQFGYQEALMAKIQAFHFKGGQGAKTGTGGHLPGSKNQGKIAQIRGIPAGQDAISPPRFR 300

Query: 292 DIYSIEDLAQLIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDADAVVIDGFKGGTG 351
           ++ S+ D  +    ++E +   +P+  K+SA H    I   +  S AD +++DG  GGTG
Sbjct: 301 ELNSVADFKRFADRVRELSGG-VPIGFKLSANHIERDIQFALDAS-ADYIILDGRGGGTG 358

Query: 352 AAPKVFRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADVFKSIALGADAVY 411
           AAP++FRD++ +P   A+A     L +QG   ++++I +GG+R   D  K++ALGAD V 
Sbjct: 359 AAPQIFRDHISVPTIPALARARRYLDQQGASGRVTLIITGGLRLPMDFVKAMALGADGVA 418

Query: 412 IGTAAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVANLIHAWTHEIQEL 471
           +  +AM A+GC     C T  C  GIATQ  +L +RL +D +A+++AN + A T  +Q +
Sbjct: 419 LANSAMQAIGCVAARICNTNNCPAGIATQNADLRQRLNIDKSAQQLANFLGASTELMQVM 478

Query: 472 LGAAGINSIE 481
             A G + ++
Sbjct: 479 ARACGHHRLQ 488