Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 1482 a.a., glutamate synthase subunit alpha (RefSeq) from Shewanella loihica PV-4

 Score =  224 bits (570), Expect = 2e-62
 Identities = 130/309 (42%), Positives = 170/309 (55%), Gaps = 3/309 (0%)

Query: 183  MSYGALSLNAHKAMAKAVKECGTFMGTGEGGLH-RDLYGYSDNVITQVASGRFGVNSEYL 241
            MS GALS  AH+A+A A+   G    +GEGG   R      ++ I Q+ASGRFGV + YL
Sbjct: 862  MSIGALSPEAHEALAVAMNRLGGRSNSGEGGEDPRRFNSERNSAIKQIASGRFGVTAHYL 921

Query: 242  NKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAISPAPHHDIYSIEDLAQ 301
                 ++IK+ QGAKPG GG LPG+KVS E++  R    G   ISP PHHDIYSIEDLAQ
Sbjct: 922  VNAEVLQIKVAQGAKPGEGGQLPGDKVSVEIAALRNARPGVTLISPPPHHDIYSIEDLAQ 981

Query: 302  LIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDADAVVIDGFKGGTGAAPKVFRDNV 361
            LI  LK+    K  + VK+ +   V  IA G+A + AD + I G+ GGTGA+P       
Sbjct: 982  LIFDLKQINP-KAMISVKLVSEPGVGTIATGVAKAYADMITISGYDGGTGASPITSVKYA 1040

Query: 362  GIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADVFKSIALGADAVYIGTAAMVAMG 421
            G P E+ +A V   L   G RHKI +   GG++   DV K+  LGA++   GT  M+A+G
Sbjct: 1041 GSPWELGLAEVHQSLVANGLRHKIRLQVDGGLKTGTDVIKAALLGAESFGFGTVPMIALG 1100

Query: 422  CTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVANLIHAWTHEIQELLGAAGINSIE 481
            C     C+   CA G+ATQ  +L +         RV         EI+E + A G+   E
Sbjct: 1101 CKYLRICHLNNCATGVATQNKQL-RDNHYHGLPERVMTYFEFMAREIREWMAALGVTEFE 1159

Query: 482  SLRGNRDRL 490
             L G  D L
Sbjct: 1160 QLVGRSDWL 1168



 Score = 31.6 bits (70), Expect = 2e-04
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 9/70 (12%)

Query: 81  EVKQDVVTQAKSGCILLSGMGN-------AKEYPIYFDKIVLDACQVTNPSIDPLREP-- 131
           E++Q +   A+ G      MG+       +K+    +D       QVTNP IDPLRE   
Sbjct: 468 ELEQVIWVLAEKGEEATGSMGDDTPMAVLSKKSRTLYDYFRQKFAQVTNPPIDPLREKHV 527

Query: 132 MELRTYVGKK 141
           M L T VG++
Sbjct: 528 MSLATCVGRE 537