Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 496 a.a., glutamate synthase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  154 bits (390), Expect = 5e-42
 Identities = 104/328 (31%), Positives = 164/328 (50%), Gaps = 17/328 (5%)

Query: 180 IGHMSYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDLYGYSDNVITQVASGRFGVNSE 239
           I  MS+GALS  A  A++    + G ++ TGEGGL         +++ Q+ + ++GV +E
Sbjct: 150 ISAMSFGALSRPAVTALSHGAAQAGCWLNTGEGGLSPYHLKGGCDLVFQIGTAKYGVRNE 209

Query: 240 Y-------LNKGAA------IEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAIS 286
           +       L   AA       EIK+ QGAKPG GG LPG KV+ E++  R IP G D+IS
Sbjct: 210 HGHLDDDKLTAIAAHPEVKMFEIKMSQGAKPGKGGILPGVKVTEEIAHIRGIPLGQDSIS 269

Query: 287 PAPHHDIYSIEDLAQLIRSLKEATRWKMPVFVKISAVHNVSAIANGIA----TSDADAVV 342
           P  H +  ++ D+  +I  ++E T     +   +  V  +    N I      S  D   
Sbjct: 270 PNGHIEFNNVGDILDMIARVREVTGKPTGIKAVLGDVQWLEDFCNEIERRGEASAPDFFT 329

Query: 343 IDGFKGGTGAAPKVFRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADVFKS 402
           +D   GGTGAAP+   D VG+P++ ++  + + L + G   +I +IASG +   + V  +
Sbjct: 330 LDSADGGTGAAPQPLMDYVGLPLKESLPILVNILIKHGLGKRIKVIASGKLIVPSRVAWA 389

Query: 403 IALGADAVYIGTAAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVANLIH 462
           +ALGAD +      M A+GC    +C    C  GI T   +L   L+  D + RVAN  H
Sbjct: 390 LALGADFIASARGNMFALGCIQALQCNKDTCPTGITTHNKKLQHGLDPRDKSTRVANYNH 449

Query: 463 AWTHEIQELLGAAGINSIESLRGNRDRL 490
              H++  +  + G+     L+ +  R+
Sbjct: 450 NLHHDLALIAHSCGLTEPRQLKPSHVRI 477