Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 544 a.a., glutamate synthase, iron-sulfur cluster-binding subunit, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  167 bits (423), Expect = 9e-46
 Identities = 160/530 (30%), Positives = 235/530 (44%), Gaps = 80/530 (15%)

Query: 3   PSTVPPK---YKVFVDPERCMLCERCTTEC-----SWGVYR------------RQGNKIL 42
           PST+  K   ++V  D   C LC RCT  C       GV+R            R  N   
Sbjct: 9   PSTLSVKDLPWQVEWDRATCALCGRCTAVCPVNAIELGVHRQRIVDAPVGLAKRPSNAHT 68

Query: 43  TYPN---------RCGACLRCVSLCPRDAITVTLNQSCGREHPVWTPEVKQDVVTQAKSG 93
            Y            C  C  C  +CP +AI            PV   E         + G
Sbjct: 69  VYHGVRQRTDAAYACVGCGMCTMVCPNNAI-----------RPVHQAEATALRFHNNRGG 117

Query: 94  CILLSGMGNAKEYPIYFDKI-VLDACQVTNPSIDPLREPMELRTYVGKKPEKLEFDYVED 152
                G G   +     D+I  +    +T+P++D  R   ELRT +G+            
Sbjct: 118 QPRTRG-GRRNDPLGLLDQIKFIRISMLTDPALDAGRHEFELRTLLGRI----------- 165

Query: 153 EIDGKKVKKAKLKTKIAPNLKLDTPIMIGHMSYGALSLNAHKAMAKAVKECGTFMG---- 208
            +  ++   A       P ++   P++IG MS+GALS N  + +   V      MG    
Sbjct: 166 -LPPEEGMAALHGNGWVPPVREIYPLVIGGMSFGALSPNMWEGLQMGVAYLNEEMGMPVR 224

Query: 209 --TGEGGLHRDLYG--YSDNVITQVASGRFGVNS------EYLNKGAAIEIKIGQGAKPG 258
             TGEGG    L    +   VI Q+ASG FG +       E      AIEIK GQGAKPG
Sbjct: 225 MCTGEGGCPPRLLRSRFLKYVILQIASGYFGWDEILHAIPEMKEDPCAIEIKYGQGAKPG 284

Query: 259 IGGHLPGEKVSAEVSMTRMIPQGSDAISPAPHHDIYSIED-LAQLIRSLKEATRWKMPVF 317
            GG L   KV+  ++  R +P G    SP  H   YSIE+ +A++I+S+  A  +++PV+
Sbjct: 285 DGGLLMWHKVNKLIASIRGVPPGVSLPSPPTHQTKYSIEEAVAKMIQSMSMAWGFRVPVY 344

Query: 318 VKISAVHNVSAIANGIATSD-ADAVVIDGFKGGTGAAPKVFRDNVGIPIEVAIAAVDDRL 376
            KIS      A+ N +  +  A  + IDG  GGTGAA  +  +++G PI   I    + L
Sbjct: 345 PKISGTATALAVLNNLVRNPYAAGLAIDGEDGGTGAAYNISMNHMGHPIASNIRDCYNAL 404

Query: 377 REQGNRHKISIIASGGIRNSADVFKS----IALGADAV----YIGTAAMVAMGCTV--CG 426
             QG +++I I+A GGI  + ++  +    I LGA  V    YI  AA   +G  V  C 
Sbjct: 405 AAQGRQNEIPIMAGGGIGKNGNLAHNAAALIMLGASMVQSGKYIMQAAAGCVGSEVDRCN 464

Query: 427 RCYTGQCAWGIATQKPELVKRLEVDDAARRVANLIHAWTHEIQELLGAAG 476
            C  G+C  GI +Q P + +RL+ +  A R+ ++  A+  E++++    G
Sbjct: 465 ICNIGRCPKGITSQDPRVYRRLDPEKVAERLVDVYLAFDTELKKVFAPLG 514