Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 1482 a.a., glutamate synthase subunit alpha (RefSeq) from Shewanella sp. ANA-3

 Score =  219 bits (557), Expect = 7e-61
 Identities = 131/327 (40%), Positives = 175/327 (53%), Gaps = 13/327 (3%)

Query: 183  MSYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDLYGYSDN-VITQVASGRFGVNSEYL 241
            MS GALS  AH+A+A A+   G    +GEGG     +    N  I Q+AS RFGV + YL
Sbjct: 862  MSIGALSPEAHEALAIAMNRLGGRSNSGEGGEDARRFNTERNSAIKQIASARFGVTAHYL 921

Query: 242  NKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAISPAPHHDIYSIEDLAQ 301
                 ++IK+ QGAKPG GG LPG KVS E++  R    G   ISP PHHDIYSIEDLAQ
Sbjct: 922  VNADVLQIKVAQGAKPGEGGQLPGHKVSVEIAGLRHARPGVTLISPPPHHDIYSIEDLAQ 981

Query: 302  LIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDADAVVIDGFKGGTGAAPKVFRDNV 361
            LI  LK+    K  + VK+ +   V  IA G+A + AD + I G+ GGTGA+P       
Sbjct: 982  LIFDLKQINT-KALISVKLVSEPGVGTIATGVAKAYADMITISGYDGGTGASPITSVKYA 1040

Query: 362  GIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADVFKSIALGADAVYIGTAAMVAMG 421
            G P E+ +A V   L E G RHKI +   GG++   DV K+  LGA++   GT  M+A+G
Sbjct: 1041 GSPWELGLAEVHQSLVENGLRHKIRLQVDGGLKTGTDVIKAALLGAESFGFGTVPMIALG 1100

Query: 422  CTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVANLIHAWTHEIQELLGAAGINSIE 481
            C     C+   CA G+ATQ  +L +         RV         E++E +   G++  E
Sbjct: 1101 CKYLRICHLNNCATGVATQDKKL-RDNHYHGLPERVMTYFEFVAEEVREWMATLGVSKFE 1159

Query: 482  ----------SLRGNRDRLRGVGLSEI 498
                      +L G  D+ RG+ L+ I
Sbjct: 1160 DLVGRSEWLHTLEGQTDKQRGLDLAPI 1186



 Score = 32.3 bits (72), Expect = 1e-04
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 9/70 (12%)

Query: 81  EVKQDVVTQAKSGCILLSGMGN-------AKEYPIYFDKIVLDACQVTNPSIDPLREP-- 131
           E++Q +   AK G      MG+       +K+    +D       QVTNP IDPLRE   
Sbjct: 468 ELEQVIWVLAKQGEEATGSMGDDTPMAVLSKKSRSLYDYFRQKFAQVTNPPIDPLREKHV 527

Query: 132 MELRTYVGKK 141
           M L T +G++
Sbjct: 528 MSLATCIGRE 537