Pairwise Alignments

Query, 281 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 552 a.a., Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region from Pseudomonas syringae pv. syringae B728a

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 6/134 (4%)

Query: 25  LRIKTDAGCMDSEKIDKLSEISKKYGRNYISFTVRLCVEIPWINYEDIPKIKEELKNLSL 84
           LR+    G + S +   +++I++ Y + Y   + R  V+  W   ED+P I  EL  + +
Sbjct: 54  LRVAVPYGQLTSRQARMMAKIARDYDKGYAHISTRQNVQFNWPALEDVPDILAELATVQM 113

Query: 85  ISGGT-GNTVRPLVACK-GTVCTHGLIDSQKICNELD--SLFFGK--KLPHKFKIGISGC 138
            +  T GN +R +   +   V    L+D +  C  +   + F  +   LP KFKI I+G 
Sbjct: 114 HAIQTSGNCLRNVTTDQFAGVAADELVDPRPWCEIVRQWTTFHPEFAYLPRKFKIAINGS 173

Query: 139 PNNCAKAQLNDIGI 152
            ++ A  +++DIG+
Sbjct: 174 TSDRAAIEVHDIGL 187



 Score = 40.4 bits (93), Expect = 9e-08
 Identities = 47/253 (18%), Positives = 91/253 (35%), Gaps = 60/253 (23%)

Query: 32  GCMDSEKIDKLSEISKKYGRNYISFTVRLCVEIPWINYEDIPKIKEELKNLSLISGGTGN 91
           G +  +++D +++++ +Y    +  +    + +  +   ++  +  EL++    +   G 
Sbjct: 349 GDVTDKQLDAIADLADRYSFGQLRTSHEQNIILADVEQRELFTLWNELRDNGFATPNIGL 408

Query: 92  TVRPLVACKGTVCTHGLIDSQKICNELDSLFFGKKLPHKFKIG-----ISGCPNNCAKAQ 146
               +    G  C+     S  I   +   F    L + F IG     ISGC N C    
Sbjct: 409 LTDIICCPGGDFCSLANAKSIPIAESIQRRF--DDLDYLFDIGELDLNISGCMNACGHHH 466

Query: 147 LNDIGIIGQRIPKINEENCNGCTLCLKSCSVDAITIVDKKAVIDYEKCVNCGKCGKSCKR 206
           +  IG++G                            VDKK    Y+              
Sbjct: 467 VGHIGVLG----------------------------VDKKGEEFYQ-------------- 484

Query: 207 KCISLKDGVLISVGGKFGKKYKIGENIGIYDAPN-LEKIVSEIMDYFKENADSHERFGDT 265
                     +S+GG   +   +G+ +G   A   +  ++ +++D + E     ERF DT
Sbjct: 485 ----------VSLGGSASRDASLGKILGPSFAQEAMPDVIEKLIDVYVEKRTEDERFIDT 534

Query: 266 IDRTGISSLKEKL 278
             R GI   KE++
Sbjct: 535 YQRIGIDPFKERV 547