Pairwise Alignments

Query, 281 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 557 a.a., nitrite reductase from Sinorhizobium meliloti 1021

 Score = 53.9 bits (128), Expect = 8e-12
 Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 8/148 (5%)

Query: 11  MQGFILQNDGKHFALRIKTDAGCMDSEKIDKLSEISKKYGRNYISFTVRLCVEIPWINYE 70
           M G  LQ     + LR+    G + S ++  L+ I++KY R Y  FT R  ++  W    
Sbjct: 42  MNGVYLQLHA--YMLRVAIPYGTLSSRQMRMLAHIARKYDRGYGHFTTRQNIQYNWPRLS 99

Query: 71  DIPKIKEELKNLSLISGGT-GNTVRPLVACKGTVCTHGLIDSQKICNELDSLFFG----- 124
           D P I +EL ++ + +  T GN +R + A          +   +   E+   +       
Sbjct: 100 DTPDILQELASVEMHALQTSGNCIRNVTADHFAGAAADEVADPRPYAEILRQWSSVHPEF 159

Query: 125 KKLPHKFKIGISGCPNNCAKAQLNDIGI 152
             LP KFKI ++G   + A  Q++DIG+
Sbjct: 160 SFLPRKFKIAVTGAERDRAAIQVHDIGL 187



 Score = 38.9 bits (89), Expect = 3e-07
 Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 5/127 (3%)

Query: 32  GCMDSEKIDKLSEISKKYGRNYISFTVRLCVEIPWINYEDIPKIKEELKNLSLISGGTGN 91
           G    E++D +++I+++Y  + I  +    + +P +   D+  +   L    L +   G 
Sbjct: 349 GDASHEQMDAVADIAEEYAFDEIRVSHEQNLILPHVALADLEPVYRALVAAGLATANAG- 407

Query: 92  TVRPLVACKGT-VCTHGLIDSQKICNELDSLFFGKKLPHKF---KIGISGCPNNCAKAQL 147
            +  ++AC G   C      S  +  E+ + F   +   +    KI ISGC N C    +
Sbjct: 408 LITDIIACPGLDYCALANARSIPVAQEISNRFGSPERQAEIGELKIKISGCINACGHHHV 467

Query: 148 NDIGIIG 154
             IG++G
Sbjct: 468 GHIGLLG 474