Pairwise Alignments

Query, 411 a.a., ammonium transporter from Methanococcus maripaludis S2

Subject, 402 a.a., Ammonia permease from Pseudomonas stutzeri RCH2

 Score =  261 bits (666), Expect = 3e-74
 Identities = 153/420 (36%), Positives = 230/420 (54%), Gaps = 41/420 (9%)

Query: 12  NIMDALNTLANSSDVMFLIFTGAFIFIMHLGFAMLEGGQVREKNVNNAMMKNMGDWIIGC 71
           N+  A+ TL + S+ +F++     +  MH GFA LE G VR KN  NA+ K + D+ +  
Sbjct: 3   NLDSAVQTLVHGSNTLFILIGAVMVLAMHAGFAFLEVGTVRLKNQVNALSKIITDFAVST 62

Query: 72  ISWLLVGSVIA---RTLNPADFFIWWGKIASATPFLTNNGLELANWFLGLVFAATAATIV 128
           +++  +G  +A     + PAD  +             ++G  L  +F  L FAA    I+
Sbjct: 63  LAYFFIGYWVAYGVTFMQPADQLV------------LDHGYALVKFFFLLTFAAAIPAII 110

Query: 129 AGGIAERIKFKSYILISIVITALLYPFFSYL---GPWGAGV-------IPFHDYAGSLMV 178
           +GGIAER +F   +  +++I A +YPFF  L   G +G            FHD+AGS++V
Sbjct: 111 SGGIAERARFGPQLCATLLIVAFVYPFFEGLIWNGNFGFQAWLEYQFGASFHDFAGSVVV 170

Query: 179 HGVGGFLALGLIAAIGPRFGRFVNKKAITIPGHNIPMSILGAYILAFGWYGFNVGSSLAL 238
           H +GG+LA G +  +G R GR+ + + +     NIP   LG++IL  GW+GFNV S+ ++
Sbjct: 171 HAMGGWLAFGAVILLGRRNGRYRDGRLVAFAPSNIPFLALGSWILIVGWFGFNVMSAQSI 230

Query: 239 SDISGLVCATTTLAMAGGGLGGCLFSKNDVLYTANGLLAGTVAICAGTDIVSPLGALIIG 298
             ISGLV   + +AM GG     L  +ND  +  NG LAG VA+CAG+D++ P+GAL  G
Sbjct: 231 EGISGLVAVNSLMAMVGGTAAAWLAGRNDPGFLHNGPLAGLVAVCAGSDLMHPVGALATG 290

Query: 299 FIAGSQVPLIFKIVE-KMGLDDVCGVIPVHATSGALGAILAGIFGMTAFGGVGGVSLTEQ 357
            IAG+     F   + +  +DDV GV P+H   G  G +  GIFG  A GG+GGVSL  Q
Sbjct: 291 AIAGALFVWAFTATQNRWKIDDVLGVWPLHGLCGIWGGVACGIFGQAALGGLGGVSLISQ 350

Query: 358 IIATLICAVYGTGAGFILGKLVG-------AVTGGLRVKESEEKAGLDISIHKLPAYPKE 410
           +I        G+G G ++  L G        +T G+R+ + EE  G D+SIH++ A  ++
Sbjct: 351 VI--------GSGLGMLVALLGGFGVYGLLKLTTGIRLSQEEEFNGADLSIHRIGALSQD 402