Pairwise Alignments

Query, 411 a.a., ammonium transporter from Methanococcus maripaludis S2

Subject, 439 a.a., Rh-like protein/ammonium transporter (NCBI) from Rhodospirillum rubrum S1H

 Score =  114 bits (284), Expect = 7e-30
 Identities = 105/396 (26%), Positives = 172/396 (43%), Gaps = 40/396 (10%)

Query: 29  LIFTGAFIFIMHLGFAMLEGGQVREKNVNNAMMKNMGDWIIGCISWLLVGS-VIARTLNP 87
           L+  G  +  +  G  + + G VR        +K +    +  +++  +GS V+   +N 
Sbjct: 59  LLMQGLLVMGLLAGLTLFQSGLVRPGASGAQAIKGICGSALAVLAFFFIGSNVLMVGVNG 118

Query: 88  A---DFFIWWGKIASATPFLTNNGLELANWFLGLVFAATAATIVAGGIAERIKFKSYILI 144
                F  +   +  ATP        +A WFL   FAA    IVAG +AER++   +++ 
Sbjct: 119 GFHGTFAFFPLPVEGATPDA------MAEWFLRAPFAALPVLIVAGALAERLRLWPFMIF 172

Query: 145 SIVITALLYPFFSYLGPWGAGVIP---FHDYAGSLMVHGVGGFLALGLIAAIGPRFGRFV 201
           ++V+ A+L P       WG G +    F D  G+ ++H   G+ AL     +G R G+F 
Sbjct: 173 AVVLAAVLGPIAGSWS-WGGGWLDRLGFVDIGGATVLHSAAGWAALVGAVLLGARKGKFT 231

Query: 202 NKKAI-TIPGHNIPMSILGAYILAFGWYGFNVGSSL-ALSDISGLVCATT---TLAMAGG 256
           +  AI  +P +++ ++  G +    GW+G   G+ L A+ +    +   T   TL     
Sbjct: 232 SNGAIHALPTNSLALATFGTFAGWIGWFGLTGGAVLLAVPEAGPAILVPTYVNTLLAGAA 291

Query: 257 GLGGCLF-----SKNDVLYTA-NGLLAGTVAICAGTDIVSPLGALIIGFIAGSQVPLIFK 310
           GL   L       +N V+     G LAG V+I A   +  PL AL IG I G  V +   
Sbjct: 292 GLAVALIVSLIVGRNGVMARGLQGALAGLVSISAAPHLPMPLVALAIGAIGGLLVVIAVP 351

Query: 311 IVEKMGLDDVCGVIPVHATSGALGAILAGIFGMTAFGGVGGVSLTEQIIATLICAVYGTG 370
           ++E++ +DD  G I VH   G    ++  +   T       V LT Q +           
Sbjct: 352 LIERLRIDDATGAISVHLICGLWATLVVSVIDPT-------VPLTTQALGAAAVGGAMVL 404

Query: 371 AGFILGKLVGAVTGGLRVKESEEKA-------GLDI 399
           A F++  L   +T GLR+   +E         GLD+
Sbjct: 405 ASFVVW-LAIKLTLGLRIAFEDESGAQEHRDLGLDV 439