Pairwise Alignments

Query, 411 a.a., ammonium transporter from Methanococcus maripaludis S2

Subject, 947 a.a., diguanylate cyclase domain-containing transport protein from Phaeobacter inhibens DSM 17395

 Score =  156 bits (395), Expect = 2e-42
 Identities = 121/410 (29%), Positives = 193/410 (47%), Gaps = 40/410 (9%)

Query: 25  DVMFLIFTGAFIFIMHLGFAMLEGGQVREKNVNNAMMKNMGD-WIIGCISW-----LLVG 78
           D  + +    F+ I+  GF  LE G VREKN  N  +KN+ D  ++G + W     L+ G
Sbjct: 5   DTAWTVIMALFVLILQCGFLCLESGTVREKNAANVALKNIADICLVGTVFWIAGFGLMFG 64

Query: 79  SVIARTLNPADFFIWWGKIASATPFLT-----------NNGLEL---ANWFLGLVFAATA 124
           S +   +    FF     + + T               + GLE    A +   + FAATA
Sbjct: 65  SSLGGLVGVDGFFPNLSNVVTGTAGRVPDHAHVGDADHSGGLEAHVSAMFLFQMAFAATA 124

Query: 125 ATIVAGGIAERIKFKSYILISIVITALLYPFFSYLGPWGAG---VIPFHDYAGSLMVHGV 181
           ATIV+G +AER +F  YI  S+ +  L+YP   +     AG    I F D+AG+ +VH V
Sbjct: 125 ATIVSGAVAERERFLGYIATSLTLAGLVYPLVGHWVWNPAGWLRQIGFIDFAGATVVHSV 184

Query: 182 GGFLALGLIAAIGPRFGRFVNKKAITIPGHNIPMSILGAYILAFGWYGFNVGSSLALSDI 241
           GG+ AL  +  +GPR GR+ +K       +++ +  LG  +L  GW  FN GS++  +  
Sbjct: 185 GGWTALIAVLFLGPRLGRYGHKNRF-FEENSVSLMALGGMLLWIGWGAFNGGSAMVFNAD 243

Query: 242 SGLVCATTTLAMAGGG-----LGGCLFSKNDVLYTANGLLAGTVAICAGTDIVSPLGALI 296
              V A T L+ AG G     +G  +          NG+L G VA  A   +V+   A +
Sbjct: 244 VAPVVARTMLSAAGAGVTCIVVGLLVNGHIRAELLINGILGGLVAGTAAIHLVTGPVAFL 303

Query: 297 IGFIAGSQVPLIFKIVEKMGLDDVCGVIPVHATSGALGAILAGIF----GMTAFGGVGGV 352
           IG      V  +  +++ + +DDV G +PVH  +G +G +   +      + A   +G +
Sbjct: 304 IGVAGALTVMFVRDVLDALKIDDVVGAVPVHLAAGVVGTLAVAVAVPYEALPAGSRLGQL 363

Query: 353 SLTEQIIATLICAVYGTGAGFILGKLVGAVT--GGLRVKESEEKAGLDIS 400
            +  QI+   + A +       +G L+  +   G LR K  +E  GL+++
Sbjct: 364 GI--QILGVGVVAAWVMAT---MGPLLWMLNRRGLLRAKPRDEVRGLNLA 408