Pairwise Alignments

Query, 411 a.a., ammonium transporter from Methanococcus maripaludis S2

Subject, 393 a.a., ammonia channel from Phaeobacter inhibens DSM 17395

 Score =  135 bits (341), Expect = 2e-36
 Identities = 114/409 (27%), Positives = 177/409 (43%), Gaps = 44/409 (10%)

Query: 22  NSSDVMFLIFTGAFIFIMHL-GFAMLEGGQVREKNVNNAMMKNMGDWIIGCISWLLVGSV 80
           N++D  ++I   A +  M L G A+  GG VR +NV +  M+      +  + WL  G  
Sbjct: 2   NAADTAWIIVATALVLFMTLPGLALFYGGLVRARNVLSVFMQCYAIACLMSVLWLAFGYS 61

Query: 81  IARTLNPADFFIWWGKIASATPFLTNNGL-----ELANWFLGLVFAATAATIVAGGIAER 135
           IA         +W G        +T + L     E+  +   + FA     ++ G   ER
Sbjct: 62  IA--FGSGTSGVWGGLDKMFLSGVTADSLSGTLPEVLFFAFQMTFAIITPALIVGAYVER 119

Query: 136 IKFKSYILISIVITALLY-PFFSYLGPWGAGVIP---------FHDYAGSLMVHGVGGFL 185
           + F   ++ S +   L Y P   ++  WG G++            D+AG ++VH   G  
Sbjct: 120 VGFGFVLVFSGLWMLLCYAPVVHWI--WGGGMLADGGIFGEVGVRDFAGGIVVHETAGLA 177

Query: 186 ALGLIAAIGPRFGRFVNKKAITIPGHNIPMSILGAYILAFGWYGFNVGSSLALSDISGLV 245
           AL +   +GPR  R       T P HN     +GA +L  GW+GFN GS LA    + + 
Sbjct: 178 ALIIAVFLGPRKNR-------TTPPHNPGYVFIGAAMLWVGWFGFNGGSQLAADGGAAMA 230

Query: 246 CATTTLAMAGGGLGGCL-----FSKNDVLYTANGLLAGTVAICAGTDIVSPLGALIIGFI 300
              T ++ A   L   L     + K  ++    G +AG  +I   +  V P+ AL+IG +
Sbjct: 231 LTVTHISAATASLTWALWEKIKYGKASMVGLVTGTIAGLASITPASGFVGPVEALVIGAV 290

Query: 301 AGSQVPLIFKIVEK-MGLDDVCGVIPVHATSGALGAILAGIFGMTA-FGGVGGVSLTEQI 358
           AG        +V   + +DD   V  VH   G  G I+  +FG  + F  VGG+      
Sbjct: 291 AGILCQEAVNVVRNLLKIDDTLDVFAVHGVGGIFGTIMIAVFGAGSWFAQVGGL------ 344

Query: 359 IATLICAVYGTGAGFILGKLVGAVTGGLRVKESEEKAGLDISIHKLPAY 407
              ++  V+      +L K+  A+T  LRV    E  GLDI++H   AY
Sbjct: 345 ---VVVGVFTAVVTVVLVKVTAAIT-PLRVDLETETNGLDITVHGERAY 389