Pairwise Alignments

Query, 411 a.a., ammonium transporter from Methanococcus maripaludis S2

Subject, 416 a.a., Rh family protein/ammonium transporter (RefSeq) from Shewanella loihica PV-4

 Score =  190 bits (483), Expect = 6e-53
 Identities = 138/406 (33%), Positives = 209/406 (51%), Gaps = 37/406 (9%)

Query: 25  DVMFLIFTGAFIFIMHLGFAMLEGGQVREKNVNNAMMKNMGDWIIGCISWLLVGSVIART 84
           D  + + +GA +  M  GFAMLE G VR KN    + KN+  + I CI +L+VG  I   
Sbjct: 19  DTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVCLYSIACIMYLVVGYNIMYV 78

Query: 85  LNPADFFI-WWGKIASATPFLTNNGLELANWFLGLVFAATAATIVAGGIAERIKFKSYIL 143
            N    ++  +  +  A     ++ LE +++F  +VF ATA +IV+G +AER+K  ++++
Sbjct: 79  DNAEGGWLPSFASLIGAQASDADHALE-SDFFFQVVFVATAMSIVSGAVAERMKLWAFLI 137

Query: 144 ISIVITALLYPFFSYLGPWGAGVIP---FHDYAGSLMVHGVGGFLALGLIAAIGPRFGRF 200
            S+V+T ++YP   Y   WG G +    F D+AGS +VH  G   A+  +  +G R G++
Sbjct: 138 FSVVMTGVIYPVEGY-WTWGGGFLSEAGFVDFAGSGIVHMAGAAAAISGVLLLGARKGKY 196

Query: 201 -VNKKAITIPGHNIPMSILGAYILAFGWYGFNVGSSLALSDISGL-----VCATTTLAMA 254
             N +   IPG N+PM+ LG +IL  GW+GFN GS L +SD         +   T  A A
Sbjct: 197 GPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLLVSDAENASAVAKIFVNTNSAAA 256

Query: 255 GGGLGG-----CLFSKNDVLYTANGLLAGTVAICAGTDIVSPLGAL--IIGFIAGSQVPL 307
            G +        ++ K D+    NG LAG VAI A  D +SP   L  +IG +AG  V  
Sbjct: 257 FGAVSALVVCKMVWGKADLTMILNGALAGLVAITA--DPLSPSLPLAGVIGMVAGGLVVF 314

Query: 308 IFKIVEKMGLDDVCGVIPVHATSGALGAILAGIFG--MTAFGGVGGVSLTEQIIATLICA 365
              + +++ +DD  G I VH  +G  G +L  +     T  G + G S+       +   
Sbjct: 315 SIVMFDRVKIDDPVGAISVHGVAGLFGVMLVPLSNADATVLGQLYGASV-------IFAW 367

Query: 366 VYGT--GAGFILGKLVGAVTGGLRVKESEEKAGLDISIHKLPAYPK 409
           V+G    A +IL      +T G+RV E EE  G+D S   + AYP+
Sbjct: 368 VFGVSFAAWYIL-----KITMGIRVSEEEEYNGMDASDCGIDAYPE 408