Pairwise Alignments

Query, 408 a.a., ammonium transporter from Methanococcus maripaludis S2

Subject, 416 a.a., probable ammonium transporter, marine subtype from Pseudomonas stutzeri RCH2

 Score =  207 bits (526), Expect = 6e-58
 Identities = 144/411 (35%), Positives = 214/411 (52%), Gaps = 40/411 (9%)

Query: 25  DVMFLVLMGVLVFSMQLGFALLEGGQVRKKNVNNVMMKNMADWLIGAVSWLFIGGVLSVS 84
           D  + V+ G LV  M  GFA+LE G VR KN   ++ KN+  + + ++ +L +G  +  S
Sbjct: 14  DTFYFVICGALVMWMAAGFAMLEAGLVRAKNTAEILTKNIVLYSLASIMYLLVGYYIMYS 73

Query: 85  LVPADFFSWWGQIFTTNFANNGIDL--------------ANWFFGLVFAATAATIVSGGV 130
                 F   G +     A   +DL              A++FF +VFAAT  ++VSG V
Sbjct: 74  SPEGGIFPSLGFLIGDEHA---VDLVAAGGEDAPYYSARADFFFQIVFAATCMSVVSGAV 130

Query: 131 AERIKFKSYLLMSIIITAILYPLFVYLGPWGSGMIP---FNDYAGSFVVHGLGGFLALGA 187
           AER+K  +++  ++++T  +YP+  +   WG G +    F D+AGS VVH  G   AL  
Sbjct: 131 AERMKLWAFIAFAVVMTGFIYPIQGFW-KWGGGFLDAAGFLDFAGSGVVHMAGAAAALAG 189

Query: 188 IAALGPRIGKF-VNKKAISIPGHNIPMSVFGAFVLAIGWYGFNVGSSFAVADISGL---- 242
           +  LG R GK+  N +  +IPG N+P++  GAF+L +GW+GFN GS   ++ I       
Sbjct: 190 VLLLGARKGKYGPNGQINAIPGANMPLATLGAFILWMGWFGFNGGSQLKMSTIEDANAVA 249

Query: 243 -VCATTTLAMAGGGIGALLAS-----KDDVLFTANGIVAGLVAICSGTDVVSPIGALIIG 296
            V   T +  AGG I AL+ +     K D+    NG +AGLVAI +     S + A +IG
Sbjct: 250 QVFVNTNMGAAGGLIAALITARLLFGKSDLTMVLNGALAGLVAITAEPLTPSALQATLIG 309

Query: 297 LVAGIQVPIVYKIVEKMGLDDVCGVIPVHGTAGILGGILTGVFGMAALGGAGGVSLVNQL 356
            V G+ V      ++K+ LDD  G I VHG AG+ G +   +    A  GA  + LV+  
Sbjct: 310 GVGGVLVVFSILGLDKLKLDDPVGAISVHGVAGMWGLLAVPLTNADATFGAQLLGLVSIF 369

Query: 357 IAAGLTVVYGTGLGFGLGKLVGGFTGGLRVTEEEEKMGLDLAEHKLPAYPD 407
               L V   + + +G+ K V     GLRV+EEEE  G+D+ E  L AYP+
Sbjct: 370 ----LWVFIASLIVWGIIKAV----MGLRVSEEEEYEGVDVVECGLEAYPE 412