Pairwise Alignments

Query, 408 a.a., ammonium transporter from Methanococcus maripaludis S2

Subject, 402 a.a., Ammonia permease from Pseudomonas stutzeri RCH2

 Score =  274 bits (700), Expect = 4e-78
 Identities = 155/407 (38%), Positives = 241/407 (59%), Gaps = 25/407 (6%)

Query: 12  NIVTGLSTLATSGDVMFLVLMGVLVFSMQLGFALLEGGQVRKKNVNNVMMKNMADWLIGA 71
           N+ + + TL    + +F+++  V+V +M  GFA LE G VR KN  N + K + D+ +  
Sbjct: 3   NLDSAVQTLVHGSNTLFILIGAVMVLAMHAGFAFLEVGTVRLKNQVNALSKIITDFAVST 62

Query: 72  VSWLFIGGVLSVSLV---PADFFSWWGQIFTTNFANNGIDLANWFFGLVFAATAATIVSG 128
           +++ FIG  ++  +    PAD              ++G  L  +FF L FAA    I+SG
Sbjct: 63  LAYFFIGYWVAYGVTFMQPADQL----------VLDHGYALVKFFFLLTFAAAIPAIISG 112

Query: 129 GVAERIKFKSYLLMSIIITAILYPLF---VYLGPWGSGM-------IPFNDYAGSFVVHG 178
           G+AER +F   L  +++I A +YP F   ++ G +G            F+D+AGS VVH 
Sbjct: 113 GIAERARFGPQLCATLLIVAFVYPFFEGLIWNGNFGFQAWLEYQFGASFHDFAGSVVVHA 172

Query: 179 LGGFLALGAIAALGPRIGKFVNKKAISIPGHNIPMSVFGAFVLAIGWYGFNVGSSFAVAD 238
           +GG+LA GA+  LG R G++ + + ++    NIP    G+++L +GW+GFNV S+ ++  
Sbjct: 173 MGGWLAFGAVILLGRRNGRYRDGRLVAFAPSNIPFLALGSWILIVGWFGFNVMSAQSIEG 232

Query: 239 ISGLVCATTTLAMAGGGIGALLASKDDVLFTANGIVAGLVAICSGTDVVSPIGALIIGLV 298
           ISGLV   + +AM GG   A LA ++D  F  NG +AGLVA+C+G+D++ P+GAL  G +
Sbjct: 233 ISGLVAVNSLMAMVGGTAAAWLAGRNDPGFLHNGPLAGLVAVCAGSDLMHPVGALATGAI 292

Query: 299 AGIQVPIVYKIVE-KMGLDDVCGVIPVHGTAGILGGILTGVFGMAALGGAGGVSLVNQLI 357
           AG      +   + +  +DDV GV P+HG  GI GG+  G+FG AALGG GGVSL++Q+I
Sbjct: 293 AGALFVWAFTATQNRWKIDDVLGVWPLHGLCGIWGGVACGIFGQAALGGLGGVSLISQVI 352

Query: 358 AAGLTVVYGTGLGFGLGKLVGGFTGGLRVTEEEEKMGLDLAEHKLPA 404
            +GL ++     GFG+  L+   T G+R+++EEE  G DL+ H++ A
Sbjct: 353 GSGLGMLVALLGGFGVYGLL-KLTTGIRLSQEEEFNGADLSIHRIGA 398