Pairwise Alignments

Query, 408 a.a., ammonium transporter from Methanococcus maripaludis S2

Subject, 409 a.a., ammonium transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  212 bits (539), Expect = 2e-59
 Identities = 141/403 (34%), Positives = 213/403 (52%), Gaps = 33/403 (8%)

Query: 25  DVMFLVLMGVLVFSMQLGFALLEGGQVRKKNVNNVMMKNMADWLIGAVSWLFIG-GVLSV 83
           D  F ++ G LV  M  GFA+LE G VR KN   ++ KN   + I   ++L +G  ++ V
Sbjct: 15  DTFFFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNFVLYAIACTTYLIVGYNIMYV 74

Query: 84  SLVPADFFSWWGQIFTTNF--ANNGIDLANWFFGLVFAATAATIVSGGVAERIKFKSYLL 141
                 +   +G +  +    A++ ++ +++FF +VF ATA ++VSG VAER+K  ++L+
Sbjct: 75  DNTEGGWLPSFGALIGSQADGADHSLE-SDFFFQVVFVATAMSVVSGAVAERMKLWAFLI 133

Query: 142 MSIIITAILYPLFVYLGPWGSGMIP---FNDYAGSFVVHGLGGFLALGAIAALGPRIGKF 198
            S ++TA +YP+  Y   WG G +    F+D+AGS +VH  G   AL  +  LG R GK+
Sbjct: 134 FSAVLTAFIYPVEGY-WTWGGGFLSAAGFSDFAGSGIVHLAGASAALAGVLLLGARKGKY 192

Query: 199 -VNKKAISIPGHNIPMSVFGAFVLAIGWYGFNVGSSFAVADIS-----GLVCATTTLAMA 252
             N +   IPG N+P++  G F+L  GW+GFN GS   V+D       G +   T  A A
Sbjct: 193 GKNGEIYPIPGSNMPLATLGTFILWFGWFGFNGGSQLMVSDFENATSVGKIFLNTNAAAA 252

Query: 253 GGGIGALLA-----SKDDVLFTANGIVAGLVAICSGTDVVSPIGALIIGLVAGIQVPIVY 307
            G I ALL       K D+    NG +AGLVAI +     SP+ ++ IG V+G  V    
Sbjct: 253 AGAIAALLVCKTTWGKADLTMVLNGALAGLVAITADPLSPSPLYSVAIGAVSGSLVVFSI 312

Query: 308 KIVEKMGLDDVCGVIPVHGTAGILGGILTGVFGMAALGGAGGVSLVNQLIAAGLTVVYGT 367
             ++K+ +DD  G I VHG  G  G ++  +    A  GA       QL+ A +   +  
Sbjct: 313 IGLDKLKIDDPVGAISVHGVCGFFGLMVVPLSNADATFGA-------QLLGAAVIFAW-- 363

Query: 368 GLGFGLGKLVGGF---TGGLRVTEEEEKMGLDLAEHKLPAYPD 407
              FG   +V G    T G+RV+EEEE  G+D+ +  + AYP+
Sbjct: 364 --VFGASLVVWGVLKATMGIRVSEEEEMEGMDMHDCGVGAYPE 404