Pairwise Alignments

Query, 408 a.a., ammonium transporter from Methanococcus maripaludis S2

Subject, 439 a.a., Rh-like protein/ammonium transporter (NCBI) from Rhodospirillum rubrum S1H

 Score =  132 bits (333), Expect = 2e-35
 Identities = 103/394 (26%), Positives = 175/394 (44%), Gaps = 38/394 (9%)

Query: 29  LVLMGVLVFSMQLGFALLEGGQVRKKNVNNVMMKNMADWLIGAVSWLFIGGVLSVSLVPA 88
           L++ G+LV  +  G  L + G VR        +K +    +  +++ FIG  + +  V  
Sbjct: 59  LLMQGLLVMGLLAGLTLFQSGLVRPGASGAQAIKGICGSALAVLAFFFIGSNVLMVGVNG 118

Query: 89  DFFSWWGQIFTTNFANNGIDLANWFFGLVFAATAATIVSGGVAERIKFKSYLLMSIIITA 148
            F   +              +A WF    FAA    IV+G +AER++   +++ ++++ A
Sbjct: 119 GFHGTFAFFPLPVEGATPDAMAEWFLRAPFAALPVLIVAGALAERLRLWPFMIFAVVLAA 178

Query: 149 ILYPLFVYLGPWGSGMIP---FNDYAGSFVVHGLGGFLALGAIAALGPRIGKFVNKKAI- 204
           +L P+      WG G +    F D  G+ V+H   G+ AL     LG R GKF +  AI 
Sbjct: 179 VLGPI-AGSWSWGGGWLDRLGFVDIGGATVLHSAAGWAALVGAVLLGARKGKFTSNGAIH 237

Query: 205 SIPGHNIPMSVFGAFVLAIGWYGFNVGSSFAVADISG--LVCATTTLAMAGGGIGALLAS 262
           ++P +++ ++ FG F   IGW+G   G+       +G  ++  T    +  G  G  +A 
Sbjct: 238 ALPTNSLALATFGTFAGWIGWFGLTGGAVLLAVPEAGPAILVPTYVNTLLAGAAGLAVAL 297

Query: 263 KDDVLFTANGIVA--------GLVAICSGTDVVSPIGALIIGLVAGIQVPIVYKIVEKMG 314
              ++   NG++A        GLV+I +   +  P+ AL IG + G+ V I   ++E++ 
Sbjct: 298 IVSLIVGRNGVMARGLQGALAGLVSISAAPHLPMPLVALAIGAIGGLLVVIAVPLIERLR 357

Query: 315 LDDVCGVIPVHGTAGILGGILTGV-----------FGMAALGGAGGVSLVNQLIAAGLTV 363
           +DD  G I VH   G+   ++  V            G AA+GGA        ++ A   V
Sbjct: 358 IDDATGAISVHLICGLWATLVVSVIDPTVPLTTQALGAAAVGGA--------MVLASFVV 409

Query: 364 VYGTGLGFGLGKLVGGFTGGLRVTEEEEKMGLDL 397
                L  GL       +G     +E   +GLD+
Sbjct: 410 WLAIKLTLGLRIAFEDESG----AQEHRDLGLDV 439