Pairwise Alignments

Query, 408 a.a., ammonium transporter from Methanococcus maripaludis S2

Subject, 416 a.a., Rh family protein/ammonium transporter (RefSeq) from Shewanella loihica PV-4

 Score =  206 bits (525), Expect = 8e-58
 Identities = 138/409 (33%), Positives = 218/409 (53%), Gaps = 29/409 (7%)

Query: 17  LSTLATSGDVMFLVLMGVLVFSMQLGFALLEGGQVRKKNVNNVMMKNMADWLIGAVSWLF 76
           +S L  + D  + ++ G LV  M  GFA+LE G VR KN   ++ KN+  + I  + +L 
Sbjct: 11  VSELKFALDTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVCLYSIACIMYLV 70

Query: 77  IG-GVLSVSLVPADFFSWWGQIFTTNFANNGIDL-ANWFFGLVFAATAATIVSGGVAERI 134
           +G  ++ V      +   +  +     ++    L +++FF +VF ATA +IVSG VAER+
Sbjct: 71  VGYNIMYVDNAEGGWLPSFASLIGAQASDADHALESDFFFQVVFVATAMSIVSGAVAERM 130

Query: 135 KFKSYLLMSIIITAILYPLFVYLGPWGSGMIP---FNDYAGSFVVHGLGGFLALGAIAAL 191
           K  ++L+ S+++T ++YP+  Y   WG G +    F D+AGS +VH  G   A+  +  L
Sbjct: 131 KLWAFLIFSVVMTGVIYPVEGY-WTWGGGFLSEAGFVDFAGSGIVHMAGAAAAISGVLLL 189

Query: 192 GPRIGKF-VNKKAISIPGHNIPMSVFGAFVLAIGWYGFNVGSSFAVADISGL-----VCA 245
           G R GK+  N +   IPG N+PM+  G F+L +GW+GFN GS   V+D         +  
Sbjct: 190 GARKGKYGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLLVSDAENASAVAKIFV 249

Query: 246 TTTLAMAGGGIGALLA-----SKDDVLFTANGIVAGLVAICSGTDVVSPIGAL--IIGLV 298
            T  A A G + AL+       K D+    NG +AGLVAI +  D +SP   L  +IG+V
Sbjct: 250 NTNSAAAFGAVSALVVCKMVWGKADLTMILNGALAGLVAITA--DPLSPSLPLAGVIGMV 307

Query: 299 AGIQVPIVYKIVEKMGLDDVCGVIPVHGTAGILGGILTGVFGMAALGGAGGVSLVNQLIA 358
           AG  V     + +++ +DD  G I VHG AG+ G +L  +    A       +++ QL  
Sbjct: 308 AGGLVVFSIVMFDRVKIDDPVGAISVHGVAGLFGVMLVPLSNADA-------TVLGQLYG 360

Query: 359 AGLTVVYGTGLGFGLGKLVGGFTGGLRVTEEEEKMGLDLAEHKLPAYPD 407
           A +   +  G+ F    ++   T G+RV+EEEE  G+D ++  + AYP+
Sbjct: 361 ASVIFAWVFGVSFAAWYIL-KITMGIRVSEEEEYNGMDASDCGIDAYPE 408