Pairwise Alignments

Query, 303 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 646 a.a., Predicted signal-transduction protein containing cAMP-binding and CBS domains from Pseudomonas fluorescens FW300-N2E2

 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 23/107 (21%), Positives = 59/107 (55%), Gaps = 4/107 (3%)

Query: 185 TPEKTIRDAAKLLSDANISGIPVMDGKKL-LGVLSLHDVADAVSRGLE--NENVTKLMAE 241
           +P+  +R+A KL+ D  +  I V++ +K  +G+ +L D+   V+ G    ++ +   M +
Sbjct: 193 SPDTPLREAVKLMHDQQVGSIVVVNEQKAPVGIFTLRDLRQVVADGAGDFSQAIVGHMTQ 252

Query: 242 KIYTISKNEKIYDALILMEKHNVGRLIVLDNEEIAIGILTRTDILNL 288
             + +S +   +DA I M + ++  + ++ ++ +  G+++  D+ +L
Sbjct: 253 APFFLSPDHSAFDAAIAMTERHIAHVCLVKDQRLC-GVVSERDLFSL 298



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 22/106 (20%), Positives = 49/106 (46%), Gaps = 18/106 (16%)

Query: 183 YITPEKTIRDAAKLLSDANISGIPVMDGKKLLGVLSLHD-----------VADAVSRGLE 231
           +++P+ +  DAA  +++ +I+ + ++  ++L GV+S  D           +A  +    +
Sbjct: 256 FLSPDHSAFDAAIAMTERHIAHVCLVKDQRLCGVVSERDLFSLQRVDLVHLARTIRNAPK 315

Query: 232 NENVTKLMAEKIYTISK-------NEKIYDALILMEKHNVGRLIVL 270
            EN+  L  E    + +       + +I   + L+  H V R+I L
Sbjct: 316 VENLVALRGEIGQLVERMLAHGASSTQITHIITLLNDHTVCRVIEL 361