Pairwise Alignments

Query, 369 a.a., TIGR04013 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

 Score = 73.6 bits (179), Expect = 1e-17
 Identities = 77/318 (24%), Positives = 137/318 (43%), Gaps = 24/318 (7%)

Query: 10  NKYSVSKLYPLIGGTLFKEFGEIIENLDSLDILIYSFMSMQEKEVLSEINELKKLK--KD 67
           N+Y  SK+  L+      E  EI E  D L +   S     +++V  ++   K LK  K 
Sbjct: 15  NEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRWKTLKDKKP 74

Query: 68  VILIAGGAHPSGCPEDTLNLGFDHVIVGEGEISLPNLINSIKSGKT---PEKIIKGKPIE 124
            ++I  G   +    D++     +V V  G  +L  L   IK  +T   P   I    IE
Sbjct: 75  GVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTSDAPVMDISFPEIE 134

Query: 125 NFD---DYEKIWPLAPIEITRGCPYNCRFCQTPQIFGKNIRHRSIESIVKIVKT----MG 177
            FD   +     P A + I  GC   C +C  P   G+ +     + + +I +     + 
Sbjct: 135 KFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVLFEIAQLAEQGVR 194

Query: 178 DIRFVTPNAFSYGSKT--GTKPDIEKLEKLMKSLFEIKKRLFFGTFPSEVRPEFVNF--E 233
           ++  +  N  +Y   T  G      +L +L+ ++  I +  F  + P E   + +    +
Sbjct: 195 EVNLLGQNVNAYRGATHDGGICSFAELLRLVATIDGIDRIRFTTSHPLEFTDDIIAVYED 254

Query: 234 TLDLVNKYCDNRYIHFGAQSGSDEVLKHIRRGHLVSDVINAVETSKEC--DLIPKVDFIF 291
           T +LV+      ++H   QSGSD +L  ++R H   +  + +   ++   D+    DFI 
Sbjct: 255 TPELVS------FLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIV 308

Query: 292 GFPDETDDQRKESIDLMK 309
           GFP ETD   ++++ L++
Sbjct: 309 GFPGETDKDFQDTMKLIR 326