Pairwise Alignments

Query, 369 a.a., TIGR04013 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 472 a.a., (dimethylallyl)adenosine tRNA methylthiotransferase from Sinorhizobium meliloti 1021

 Score = 60.5 bits (145), Expect = 9e-14
 Identities = 78/351 (22%), Positives = 143/351 (40%), Gaps = 38/351 (10%)

Query: 36  LDSLDILIYSFMSMQEK---EVLSEINELKKLKK-------DVILIAGGAHPSGCPEDTL 85
           L+  D ++ +   ++EK   +V SE+  L++LKK       ++++   G       ++ L
Sbjct: 56  LEDADFVLLNTCHIREKAAEKVYSELGRLRELKKAKALEGREMLIGVAGCVAQAEGDEIL 115

Query: 86  NL--GFDHVIVGEGEISLPNLINSIKSGKT---PEKIIKGK----PIENFDDYEKIWPLA 136
                 D VI  +    LP+ +   ++G+     E  I+ K    P  +          A
Sbjct: 116 RRVPAVDLVIGPQTYHRLPDALKRARAGQRIVETEYAIEDKFVHLPAPDKAKTRARGVTA 175

Query: 137 PIEITRGCPYNCRFCQTPQIFGKNIRHRSIESIVKIVKTM-GDIRFVTPNAFSYGSKTGT 195
            + +  GC   C FC  P   G  +     + + +  K + G +R +T    +  +  G 
Sbjct: 176 FLTVQEGCDKFCTFCVVPYTRGSEVSRPVAQIVAEAEKLVEGGVREITLLGQNVNAWHGE 235

Query: 196 KPDIEKLEKLMKSLFEIKKRLFFGTFPSEVRPEFVNFETLDLVNKYCDNR--------YI 247
            P   +      SL ++ +RL  G      R  +      D+ +   +          Y+
Sbjct: 236 GPHGREW-----SLGDLLRRL--GEIDGLARLRYTTSHPRDMDDSLIEAHRSMAKLMPYL 288

Query: 248 HFGAQSGSDEVLKHIRRGHLVSDVINAVE--TSKECDLIPKVDFIFGFPDETDDQRKESI 305
           H   QSGSD +LK + R H  ++ +  VE   + + DL    DFI GFP ETD   ++++
Sbjct: 289 HLPVQSGSDRILKAMNRRHTAAEYLALVERIRAAQPDLALSGDFIVGFPGETDQDFEDTL 348

Query: 306 DLMKYIIKKNGKVHAHYFMP-LCGTYFENSTPELLEKETLDILGKMAKKGQ 355
            L++ +         +   P   G   +   PE ++ + L+IL  +  K Q
Sbjct: 349 RLVEEVNYAQAFSFKYSTRPGTPGAELKEQVPEDVKAKRLEILQALLVKQQ 399