Pairwise Alignments

Query, 369 a.a., TIGR04013 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 493 a.a., MiaB-like putative RNA modifying enzyme YliG (RefSeq) from Shewanella amazonensis SB2B

 Score = 48.1 bits (113), Expect = 5e-10
 Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 15/186 (8%)

Query: 136 APIEITRGCPYNCRFCQTPQIFGKNIRHRSIESIVKIVKTM-----GDIRFVTPNAFSYG 190
           A ++I+ GC   C FC  P + G ++  R + S++   K +      +I  V+ +  +YG
Sbjct: 190 AYLKISEGCDNRCTFCIIPALRG-DLDSRGVGSVLDEAKRLVESGVQEILVVSQDTSAYG 248

Query: 191 SKTGTKPDIEKLEKLMKSLFEIKKRLFFGTFPSEVRPEFVN-----FETLDLVNKYCDNR 245
                + D      + + +  + ++L  G   + VR  +V       + + L+ +     
Sbjct: 249 KDKDGRTDFWNGMPVKQDITSLARQL--GKMGAWVRLHYVYPYPWVDDLIPLMAEGLILP 306

Query: 246 YIHFGAQSGSDEVLKHIRRGHLVSDVINAVETSKEC--DLIPKVDFIFGFPDETDDQRKE 303
           Y+    Q  S  VLK ++R   V   ++A++  +E   DL+ +  FI GFP ET++  + 
Sbjct: 307 YLDLPLQHASPRVLKMMKRPGRVDRQLDAIKKWREICPDLVIRSTFIVGFPGETEEDFEM 366

Query: 304 SIDLMK 309
            +D ++
Sbjct: 367 LLDFLR 372