Pairwise Alignments

Query, 369 a.a., TIGR04013 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 467 a.a., tRNA-i(6)A37 modification enzyme MiaB (NCBI) from Rhodospirillum rubrum S1H

 Score = 54.7 bits (130), Expect = 5e-12
 Identities = 71/306 (23%), Positives = 133/306 (43%), Gaps = 37/306 (12%)

Query: 31  EIIENLDSLDILIYSFMSMQEK---EVLSEINELKKLKKDV--------ILIAGGAHPSG 79
           +++   D  D++I +   ++EK   +V S++  L+  K+ +        + +AG    + 
Sbjct: 33  DLVSEADGADLVILNTCHIREKAAEKVFSDLGRLRPFKEAMAAEGRRMLVAVAGCVAQAE 92

Query: 80  CPEDTLNLGFDHVIVG-EGEISLPNLINSIKSGKTPEKIIKGKPIENFDDY----EKIWP 134
             E         ++VG +    LP ++  ++ G     +    PIE   D+    +   P
Sbjct: 93  GAELMARAKIVDMVVGPQAYHRLPEMVAKVERG-AGRVLDTDFPIEPKFDFLPAPQAHGP 151

Query: 135 LAPIEITRGCPYNCRFCQTPQIFGKNIRHRSIESIVKIVKTM--GDIRFVTPNAFSYGSK 192
            A + +  GC   C FC  P   G     R +  +++    +  G +R +T    +  + 
Sbjct: 152 SAFLSVQEGCDKFCTFCVVPYTRGAEYS-RPVADVLREAALLAEGGVREITLLGQNVNAY 210

Query: 193 TGTKPDIEK--LEKLMKSLFEIK--KRLFFGT-FPSEVRPEFV--NFETLDLVNKYCDNR 245
            G  PD     L +L ++L EI    RL + T  P +V  + +  + E   L        
Sbjct: 211 HGEAPDGRTWGLGRLARALAEIPGVARLRYTTSHPRDVDDDLIAAHREVAALTP------ 264

Query: 246 YIHFGAQSGSDEVLKHIRRGHLVSD---VINAVETSKECDLIPKVDFIFGFPDETDDQRK 302
           +IH   QSGSD +L  + RGH V     +I+ +  +++ D+    DFI GFP E++   +
Sbjct: 265 FIHLPVQSGSDRILAAMNRGHDVEGYRRIIDRLRAARD-DMAFSSDFIVGFPGESERDFQ 323

Query: 303 ESIDLM 308
            ++ L+
Sbjct: 324 ATLALI 329