Pairwise Alignments

Query, 369 a.a., TIGR04013 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 440 a.a., (dimethylallyl)adenosine tRNA methylthiotransferase MiaB from Phaeobacter inhibens DSM 17395

 Score = 64.3 bits (155), Expect = 6e-15
 Identities = 85/367 (23%), Positives = 162/367 (44%), Gaps = 44/367 (11%)

Query: 10  NKYSVSKLYPLIGGTLFKEFGEIIENLDSLDILIYSFMSMQEK---EVLSEINELKKLKK 66
           N Y   ++   +GG  + E     ++ D  D+++ +   ++EK   +V SE+   K LK 
Sbjct: 17  NVYDSERMAEALGGEGYVE----TKSPDDADMILLNTCHIREKAAEKVYSELGRFKGLKA 72

Query: 67  DV----ILIAGGAHPSGCPEDTLNLGFDHVIVG-EGEISLPNLINSIKSGKTPEKIIKGK 121
           +     I +AG    +   E         ++VG +    LP +    + G   EK++   
Sbjct: 73  EKPDLKIGVAGCVAQAEGQEIMRRQPLVDLVVGPQSYHRLPEMEAKAREG---EKVLDTD 129

Query: 122 PIENFDDYEKI--------WPLAPIEITRGCPYNCRFCQTPQIFGKNIRHRSIESIVKIV 173
             E  D +EK+         P A + +  GC   C FC  P   G  +  R  + I++  
Sbjct: 130 FPEE-DKFEKLKNRPKAKRGPTAFLTVQEGCDKFCAFCVVPYTRGAEVS-RPADRILREA 187

Query: 174 KTMGD--IRFVTPNAFSYGSKTGTKPDIEKLEKLMKSLFEIKK-----RLFFGT-FPSEV 225
           + + +  +R +T    +  +  G  P+ +    L + ++E+ K     R+ F T  P+++
Sbjct: 188 QDLVERGVREITLLGQNVNAYHGAGPNGDMT--LAQLIWELDKVDGLERIRFTTSHPNDM 245

Query: 226 RPEFVNFETLDLVNKYCDNRYIHFGAQSGSDEVLKHIRRGHLVSDVINAVETSKEC--DL 283
           + + +  E      K     Y+H   Q+GSD++LK + R H     +  +E  +    D+
Sbjct: 246 QDDLI--EAHGTCAKLMP--YLHLPVQAGSDKILKRMNRAHTAESYLRLIERIRAARPDI 301

Query: 284 IPKVDFIFGFPDETDDQRKESIDLMKYIIKKNGKVHAHYFMPLCGTYFENSTPELLEKET 343
           +   DFI GFP+ET+   + ++DL++ +  K G  ++  +    GT      P++  KE 
Sbjct: 302 LISGDFIVGFPEETEADFQATLDLVEEV--KYGTAYSFKYSTRPGTP-AAERPQVDPKEA 358

Query: 344 LDILGKM 350
            D L ++
Sbjct: 359 DDRLQRL 365