Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 322 a.a., Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) from Pseudomonas fluorescens FW300-N2E2

 Score =  145 bits (365), Expect = 2e-39
 Identities = 95/315 (30%), Positives = 159/315 (50%), Gaps = 13/315 (4%)

Query: 9   SKIDSELKKYMEKDTKLYGA-SKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVE 67
           S +D  +KK +     L      ++  AGGKR+RP L +L       E  ++   A ++E
Sbjct: 15  SAVDGIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDMRLLAATIE 74

Query: 68  LIHNYTLVHDDIMDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAHE 127
            +H  TL+HDD++D    RRG  T + ++G   ++L GD LY+++FE +  +        
Sbjct: 75  FLHTATLLHDDVVDMSGMRRGRSTANAMWGNAPSVLVGDFLYSRSFEMMVELGSM----P 130

Query: 128 VLKVLSKACVEVCEGQTEDMEFEERFPTLDE-YLEMISKKTGALIVAPVEIGAVMADCTP 186
           V+K+LS+A   + EG+   +       T +E Y+E+I  KT  L  A     A +A  + 
Sbjct: 131 VMKILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAAALAGASV 190

Query: 187 EEREALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAMENLSED 246
           E+ EAL  +   +G+ FQ+ DD+LD  GD +T+GK VG D+ EGK T+ +I+ M   + +
Sbjct: 191 EQSEALRTFGDHLGVAFQLVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYTMREGTPE 250

Query: 247 KKERLLQILGNQDANQQEVAEAIELLADSINYAKDTMKNATEEAKDYLKIFDA----EKR 302
           +   + Q +        E  E+I +  ++    + T K A +     +K  DA    E R
Sbjct: 251 QAALVRQAI---QKGGIEDLESIRVAVEASGSLEYTAKLARDYVARAIKCLDALPASEYR 307

Query: 303 KNLENIADFIIERIH 317
             L  +++F + R H
Sbjct: 308 DALVELSEFAVARTH 322