Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 295 a.a., Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) from Pseudomonas fluorescens FW300-N2E2

 Score =  129 bits (323), Expect = 1e-34
 Identities = 91/263 (34%), Positives = 138/263 (52%), Gaps = 12/263 (4%)

Query: 24  KLYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVELIHNYTLVHDDI--MD 81
           +LY A ++ ++ GGKRVRP L+         +  +    A +VELIH Y+LVHDD+  MD
Sbjct: 30  RLYEAMRYSVMNGGKRVRPLLAYAACEALGGQAEQANGAACAVELIHAYSLVHDDLPAMD 89

Query: 82  NDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAHEV------LKVLSKA 135
           +DD RRG PT H  + E  AILAGD L + AF AL +   S+   +V         L+  
Sbjct: 90  DDDLRRGQPTTHKQFDEACAILAGDGLQSLAFSALLDPALSDCPAQVRLDMVSALALAAG 149

Query: 136 CVEVCEGQTEDMEFEERFPTLDEYLEMISKKTGALIVAPVEIGAVMAD-CTPEEREALCN 194
              +  GQ  D+              M   KTGALI A V +GA+ +   TP + +AL  
Sbjct: 150 PAGMVGGQAIDLGSVGLKLDQSALEYMHRHKTGALIEASVRLGALASGRATPAQLQALQT 209

Query: 195 YAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKT---MMVIHAMENLSEDKKERL 251
           YA+ IG+ FQ+QDD+LD+  D +T+GK  G+DI   K T   ++ + A +  + + +++ 
Sbjct: 210 YARAIGLAFQVQDDILDVESDTQTLGKRQGADIARDKPTYPALLGLDAAKAYALELRDQA 269

Query: 252 LQILGNQDANQQEVAEAIELLAD 274
           L  L   DA  + + +    + +
Sbjct: 270 LAALRPFDAAAEPLRDLARYIVE 292