Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 301 a.a., farnesyl-diphosphate synthase from Synechococcus elongatus PCC 7942

 Score =  142 bits (357), Expect = 1e-38
 Identities = 87/217 (40%), Positives = 123/217 (56%), Gaps = 8/217 (3%)

Query: 25  LYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVELIHNYTLVHDDI--MDN 82
           +Y + ++ LLA GKR+RP L + +  L        +  A ++E++H  +L+HDD+  MDN
Sbjct: 38  IYESMRYSLLAEGKRLRPILCLASCELAGGTAAIALPTACALEMVHTMSLIHDDLPSMDN 97

Query: 83  DDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAHEVLKVLSKACVEV--- 139
           DD RRG PT H VYGE IAILAGD L   AFEA++       A  VLKV++     V   
Sbjct: 98  DDFRRGRPTNHKVYGEDIAILAGDALLTYAFEAIARHTPEVPADRVLKVIAALARAVGAE 157

Query: 140 --CEGQTEDMEFEERFPTLDEYLEMI-SKKTGALIVAPVEIGAVMADCTPEEREALCNYA 196
               GQ  D++ E R     E L  I + KTGAL+   V  GA++A  + E +E L  YA
Sbjct: 158 GLVGGQVVDLQSEGRDDVNLETLHYIHTHKTGALLEVSVVSGAILAGASEELQEQLRTYA 217

Query: 197 KRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKT 233
           ++IG+ FQ+ DD+LD+    + +GK  G D+   K T
Sbjct: 218 QKIGLAFQVIDDILDITATAEELGKTAGKDLAAKKAT 254