Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 293 a.a., geranyltranstransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  144 bits (364), Expect = 2e-39
 Identities = 99/277 (35%), Positives = 149/277 (53%), Gaps = 27/277 (9%)

Query: 9   SKIDSELKKYMEKDTK----LYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPAL 64
           S++D+ L  +++   +    L  A +H  L GGKR+RP+L      L   +  ++   A 
Sbjct: 11  SRVDAVLAAHIDALPQTAPALKAAMRHGALIGGKRIRPFLVYAVGELLGVDKAKLDRLAA 70

Query: 65  SVELIHNYTLVHDDI--MDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDS 122
           +VE +H Y+L+HDD+  MD+D+ RRG PTVH  + E  AILAGD L   AFE +S   D+
Sbjct: 71  AVECVHAYSLIHDDLPAMDDDNLRRGKPTVHIAFDEATAILAGDALQTLAFEIISE-SDA 129

Query: 123 NKAHE----VLKVLSKAC--VEVCEGQTEDMEFEERFPTLDEYLEMISKKTGALIVAPVE 176
             A +    ++  L++A   + +C GQ  D+  E +  +LDE   + + KTGALI A VE
Sbjct: 130 GLAPKAQVAMIAALARASGYLGMCGGQALDLAGEGKSISLDELTRLHNLKTGALIRAAVE 189

Query: 177 IGAVMADCTPEEREALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMV 236
           +  + AD +  +  AL  YA  IG+ FQ+QDD+LD+    + IGKP GSD+   K T   
Sbjct: 190 LALIAADASDADTAALRAYADAIGLAFQVQDDILDITATTEEIGKPQGSDLDANKSTY-- 247

Query: 237 IHAMENLSEDKKERLLQILGNQDANQQEVAEAIELLA 273
                        +LL + G +      VA+A+  LA
Sbjct: 248 ------------PKLLGLDGARQTADALVADALSALA 272