Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 332 a.a., octaprenyl-diphosphate synthase IspB from Phaeobacter inhibens DSM 17395

 Score =  139 bits (350), Expect = 9e-38
 Identities = 93/291 (31%), Positives = 154/291 (52%), Gaps = 10/291 (3%)

Query: 31  HLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVELIHNYTLVHDDIMDNDDQRRGIP 90
           HL+ AGGKR+RP L++    L        +  A +VE IH  TL+HDD++D   QRRG P
Sbjct: 46  HLVEAGGKRLRPMLTLAAARLCGYSGDNHVKLAATVEFIHTATLLHDDVVDESGQRRGRP 105

Query: 91  TVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAHEVLKVLSKACVEVCEGQTEDMEFE 150
           T + ++    ++L GD L+A++F+ +  +E  +    VL +L+ A   + EG+   M   
Sbjct: 106 TANLLWDNKSSVLVGDYLFARSFQLM--VETGSL--RVLDILANASATIAEGEVLQMTAA 161

Query: 151 ERFPTLDE--YLEMISKKTGALIVAPVEIGAVMADCTPEEREALCNYAKRIGMTFQIQDD 208
               T DE  YL+++  KT AL  A  + G V+A+    + +AL  Y   +G+ FQI DD
Sbjct: 162 SDLAT-DEGIYLQVVRGKTAALFSAATQAGGVVANAPETQIDALFAYGDALGIAFQIADD 220

Query: 209 VLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAMENLSEDKKERLLQIL--GNQDANQQEVA 266
           +LD  GD    GK VG D  E K T+ VI A+   + +++   ++ +  G QD    + A
Sbjct: 221 LLDYQGDSAATGKNVGDDFRERKLTLPVIKAVAQATAEERGFWVRTIEKGRQDEGDLDHA 280

Query: 267 EAIELLADSINYAKDTMKNATEEAKDYLKIF-DAEKRKNLENIADFIIERI 316
            A+    D++   +    +   +A++ L    D   R+ L ++AD+++ R+
Sbjct: 281 LALMDKYDTLTATRHDAMDWVAKAQNALTALPDDPIRQMLHDLADYVVARL 331