Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 293 a.a., polyprenyl synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  145 bits (366), Expect = 1e-39
 Identities = 96/272 (35%), Positives = 142/272 (52%), Gaps = 14/272 (5%)

Query: 10  KIDSELKKYM----EKDTKLYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALS 65
           ++D +L+ ++    + + +L  A +H  L GGKR+RP+L      +    L  + A A +
Sbjct: 12  RVDGQLRHFINAQDDTEPQLKAAMEHGALIGGKRIRPFLVYAVGEMLGVPLERLDACAAA 71

Query: 66  VELIHNYTLVHDDI--MDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSN 123
           +E IH Y+L+HDD+  MD+D  RRG PTVH  + E  AILAGD L   AFE +S      
Sbjct: 72  IECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFNEATAILAGDALQTLAFEIISQEGGEL 131

Query: 124 KAHEVL---KVLSKAC--VEVCEGQTEDMEFEERFPTLDEYLEMISKKTGALIVAPVEIG 178
            A + L   + L+KA     +C GQ  D+   +R   L+    +   KTGALI   VE+ 
Sbjct: 132 SASQQLAMVRALAKASGYSGMCGGQAMDLNATDRQIDLETLKRLHRLKTGALIRCAVELP 191

Query: 179 AVMADCTPEEREALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKT---MM 235
            + A  T E+   L  +A  IG+ FQ+QDDVLD+I   + +GKP GSD    K T   ++
Sbjct: 192 IIAAKVTDEQASHLLTFADAIGLAFQVQDDVLDIIASTEELGKPQGSDCESNKSTYPKLL 251

Query: 236 VIHAMENLSEDKKERLLQILGNQDANQQEVAE 267
            +   +  ++   E  L  L     N Q +AE
Sbjct: 252 GLSGAQATAKSLIEDALSALAKLPYNSQLIAE 283