Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 331 a.a., Polyprenyl synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  144 bits (362), Expect = 4e-39
 Identities = 93/300 (31%), Positives = 157/300 (52%), Gaps = 17/300 (5%)

Query: 29  SKHLLLAGGKRVRPYLSILTY---------LLKKDELTEIMAPALSVELIHNYTLVHDDI 79
           ++H+L AGGKR+RP L++LT          L +K    ++   A SVEL+H+ TL+HDDI
Sbjct: 34  AEHVLRAGGKRLRPLLTLLTARALGAEGGGLFRKSSGPDLYPLACSVELLHSATLLHDDI 93

Query: 80  MDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAHEVLKVLSKACVEV 139
           +D  D RRG+P  HT++G+   +LAGD L A A   ++   D+     + + +++A V+ 
Sbjct: 94  LDGADLRRGLPAAHTMFGQTETVLAGDALLALANRIVARYGDAR----LTETIAEAIVQT 149

Query: 140 CEGQTEDMEFEERFPT-LDEYLEMISKKTGALIVAPVEIGAVMADCTPEEREALCNYAKR 198
             G+  ++  +       D Y+++I+ KT  ++ A  E+GA+ A    E  +A   +   
Sbjct: 150 ATGEIVEIAHQRSTDHGHDTYIDIITGKTAWMLRASCELGALAAQAPDEAVQAAAGFGLN 209

Query: 199 IGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAMENLSEDKKERLLQILGNQ 258
           +G+ FQI DD LD     K  GKPVG D+ EGK T  +I+ +E L+  +++  +      
Sbjct: 210 LGIAFQIVDDALDFAASSKDTGKPVGGDLREGKLTPPLIYYLETLTPQERDAFVTRFRQG 269

Query: 259 DANQQEVAE-AIELLADSIN-YAKDTMKNATEEAKDYLKIF-DAEKRKNLENIADFIIER 315
             +   VAE A +L A   +   +    +  ++A   L    D  +R+ L    D+++ R
Sbjct: 270 TFDDATVAEVAADLRARGCDAKTRQLAASYLDKASACLDALPDTPERRILRQSIDYVLNR 329