Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 293 a.a., geranyltranstransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  141 bits (356), Expect = 2e-38
 Identities = 93/280 (33%), Positives = 147/280 (52%), Gaps = 25/280 (8%)

Query: 5   REILSKIDSELKKYME--KDT--KLYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIM 60
           +E   ++D +LK+     +DT  +L  A  H  L GGKR+RP+L      +    L ++ 
Sbjct: 7   KEYQLRVDDQLKQRFSTLEDTAPQLKAAMTHGALLGGKRIRPFLVYSVGQMFGVPLEKLD 66

Query: 61  APALSVELIHNYTLVHDDI--MDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSN 118
           A A ++E IH Y+L+HDD+  MD+D  RRG PTVH  + E  AILAGD L   AFE ++ 
Sbjct: 67  ACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLAFEIVTE 126

Query: 119 IEDSNKAHE---VLKVLSKACVE--VCEGQTEDMEFEERFPTLDEYLEMISKKTGALIVA 173
                 + +   +++ L+KA     +C GQ  D+   ++   L    ++ + KTGALI  
Sbjct: 127 AVPGITSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKHIDLKALTQLHNMKTGALISC 186

Query: 174 PVEIGAVMADCTPEEREALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKT 233
            VE+  + A+   ++ + +  +A  +G+ FQ+QDD+LD+I   + +GKP GSD    K T
Sbjct: 187 AVELALIAANAPKDQYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDAESNKST 246

Query: 234 MMVIHAMENLSEDKKERLLQILGNQDANQQEVAEAIELLA 273
                           +LL + G +D   Q + EA+  LA
Sbjct: 247 F--------------PQLLGLQGAKDTATQLIQEALSALA 272