Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 321 a.a., octaprenyl-diphosphate synthase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  131 bits (329), Expect = 2e-35
 Identities = 94/289 (32%), Positives = 147/289 (50%), Gaps = 9/289 (3%)

Query: 31  HLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVELIHNYTLVHDDIMDNDDQRRGIP 90
           H+L AGGKR+RP L++L          +I   A SVEL+H+ TL+HDDI+D+ D RRG+ 
Sbjct: 36  HVLKAGGKRLRPLLTLLVARALGYADDDIYPLACSVELLHSATLLHDDILDDADLRRGMA 95

Query: 91  TVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAHEVLKVLSKACVEVCEGQ-TEDMEF 149
             HTV+G    +LAGD L A A   ++   D      +   +S+A +    G+  E    
Sbjct: 96  AAHTVFGSTATVLAGDALLALANLIVARYGDP----RLTACISEAIIRTATGEIVEIAHM 151

Query: 150 EERFPTLDEYLEMISKKTGALIVAPVEIGAVMADCTPEEREALCNYAKRIGMTFQIQDDV 209
                  D Y+++I+ KT  ++ A  E+GA+ A  + E   A   +   +G+ FQI DD 
Sbjct: 152 RGTDHGRDTYIDIITGKTAWMLRASCELGALRAGASEEAVRAAAAFGLDLGIAFQIVDDA 211

Query: 210 LDLIGDQKTIGKPVGSDIVEGKKTMMVIHAMENLSEDKKERLLQILGNQDANQQEVAE-A 268
           LD   D+   GKPVG D+ EGK T  +I+ +E LS  ++E  +    +   +  +VA  +
Sbjct: 212 LD-FADRADTGKPVGGDLREGKLTPPLIYYLETLSGPEREAFISRFRDGGFSGDDVARIS 270

Query: 269 IELLA-DSINYAKDTMKNATEEAKDYLKIF-DAEKRKNLENIADFIIER 315
            E+ A   I   ++   N  E+A   L+   D  +R+ L     ++  R
Sbjct: 271 AEIRALGIIERTRELAGNYIEKAAASLETLPDCPERRTLMQTLAYVQHR 319