Pairwise Alignments

Query, 355 a.a., type 2 isopentenyl-diphosphate Delta-isomerase from Methanococcus maripaludis S2

Subject, 378 a.a., alpha-hydroxy-acid oxidizing enzyme from Vibrio cholerae E7946 ATCC 55056

 Score = 45.8 bits (107), Expect = 2e-09
 Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 27/148 (18%)

Query: 193 PFIAKQVGEGFSKKDAIFLKEIGFDAIDVGGSGGTSWAAVELYRIKDEEQKNFSNQYFNW 252
           P I K + +    KDA+     G D I V   GG     V                    
Sbjct: 247 PMIIKGILDTEDAKDAV---RFGADGIVVSNHGGRQLDGV-------------------- 283

Query: 253 GIPTAASILEVNSAFSGP--IIATGGIRTGIDIAKSISIGANCCGTALPILKA-ALKSSE 309
            + T  ++  +  A  G   I+   GIRTG+D+ + +++GA+C       + A A +   
Sbjct: 284 -LSTVQALPAIADAVKGDLKILVDSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRA 342

Query: 310 AVTTVLERMIKELKTTMFLTGCNNINEL 337
            V  +L+   KE++  M LTG  +I EL
Sbjct: 343 GVENLLDLYEKEMRVAMTLTGAKSIAEL 370



 Score = 24.3 bits (51), Expect = 0.006
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 30 LEDVELIHSGISNCDLDDIDTSIEIFGKKLNAPLIVA--AITGGHPKAKEV 78
          L D+ L    +S  D+ ++    E+FG+K+  P+ ++   +TG + +  EV
Sbjct: 42 LADIALRQRVLS--DMSELSLETELFGEKMALPIALSPVGLTGMYARRGEV 90