Pairwise Alignments

Query, 355 a.a., type 2 isopentenyl-diphosphate Delta-isomerase from Methanococcus maripaludis S2

Subject, 341 a.a., dehydrogenase, FMN-dependent family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 44.7 bits (104), Expect = 4e-09
 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 30/167 (17%)

Query: 179 KEIISNYNKIHGK-IPFIAKQVGEGFSKKDAIFLKEIGFDAIDVGGSGGTSWAAVELYRI 237
           +E+ +   K+HG    FI K +       DA+   E+G DAI V   GG         R+
Sbjct: 194 EELAAIVTKVHGAGARFILKGI---MCADDALRAAEVGVDAIVVSNHGG---------RV 241

Query: 238 KDEEQKNFSNQYFNWGIPTAASILE-VNSAFSG--PIIATGGIRTGIDIAKSISIGANCC 294
            D               P  A +L  +  A  G   ++  GG+R G+D+ K +++GA+  
Sbjct: 242 LDHT-------------PGTAEVLPAIADAVKGRLAVLVDGGVRDGVDVFKMLALGADAV 288

Query: 295 GTALPILKAALKS-SEAVTTVLERMIKELKTTMFLTGCNNINELKSA 340
               P   AA+   +E V + ++ +  +L   M LTG  ++  +  A
Sbjct: 289 MIGRPFSIAAVGGLAEGVASYVDTLKAQLVQAMILTGSADVAGISRA 335