Pairwise Alignments

Query, 549 a.a., Flp pilus assembly complex ATPase component TadA from Methanococcus maripaludis S2

Subject, 569 a.a., type IV-A pilus assembly ATPase PilB (RefSeq) from Shewanella loihica PV-4

 Score = 65.5 bits (158), Expect = 5e-15
 Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 24/203 (11%)

Query: 297 AKPANTLIVGG-TGSGKTTTLNV-VSMFSMYTDRLVTIEDTPELQVPLTHLIKMITRPGR 354
           AKP   ++V G TGSGKT +L   +++ +     + T ED  E+ +   + + +  + G 
Sbjct: 318 AKPQGMILVTGPTGSGKTVSLYTGLNILNTEERNISTAEDPVEINLEGVNQVHINLKAG- 376

Query: 355 PGIQGYEITMDDLIKNSLRMRPDRIFVGEVRGSEAHSLLV-AMNTGHDGCSGTLHANSAD 413
                  +T    +++ LR  PD + VGE+R  E   + + A  TGH   S TLH NSA 
Sbjct: 377 -------LTFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLVLS-TLHTNSAA 428

Query: 414 EALIRLINPPMNVPKVMMSSVDFIINQQRIKRNKKTVRRILGVVEIGGSGENITKTELFK 473
           E L RLIN  M VP   ++S   +I  QR+ R   T  R           E + + EL K
Sbjct: 429 ETLTRLIN--MGVPGYNIASSVNLIIAQRLARRLCTECR---------QPEEVPEHELLK 477

Query: 474 YDGISDSVVKTGICMWEEDVCQI 496
             G + + +  G  +++   C +
Sbjct: 478 L-GFTQAQIDEGFTVYKPVGCDL 499