Pairwise Alignments

Query, 173 a.a., helix-turn-helix domain-containing protein from Methanococcus maripaludis S2

Subject, 173 a.a., helix-turn-helix domain-containing protein from Methanococcus maripaludis JJ

 Score =  330 bits (845), Expect = 1e-95
 Identities = 162/173 (93%), Positives = 166/173 (95%)

Query: 1   MEAILKKLVNTKERKLILTKLLKEPGCCEDLSKELNISKGLPAQFLKLCTSLNLVKRERI 60
           MEAILKKLVNTKERKLILTKLLKEP CCEDLS ELNISKGLPAQFLKLCTSLNLVKRER 
Sbjct: 1   MEAILKKLVNTKERKLILTKLLKEPMCCEDLSNELNISKGLPAQFLKLCTSLNLVKRERT 60

Query: 61  SHKVYYSINPENYLKIYNAVTIEDKKTEEKKNLKHSLKKDEFQTTLSVENTLKDYDIKKI 120
           SH+VYYSINPENYLKIYNAV IED+K EEKKNLKHSLKKDEFQTTLSVENT KDYDIKKI
Sbjct: 61  SHRVYYSINPENYLKIYNAVVIEDRKIEEKKNLKHSLKKDEFQTTLSVENTSKDYDIKKI 120

Query: 121 DNGFGGTTFILNDKDSSFEIFKTNENNYWCVACQSNDCEHVLYLKKASSKKRN 173
           DNGFGGTTFILNDKDSSFEIFKTNENNYWCVACQS++CEHVLYLKKA SKKRN
Sbjct: 121 DNGFGGTTFILNDKDSSFEIFKTNENNYWCVACQSDNCEHVLYLKKAYSKKRN 173