Pairwise Alignments

Query, 335 a.a., potassium channel protein from Methanococcus maripaludis S2

Subject, 233 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 71.2 bits (173), Expect = 2e-17
 Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 11/234 (4%)

Query: 98  KMKKRIEMLENHYIVCGYGRIGRVVIDRLRESGLDYVAIDNNSEILQAEFEKDPNFNYIV 157
           K  +R+      Y V G GR G  +   L E G + + ID++ E++ A  E     + + 
Sbjct: 9   KFLRRLSKDRKQYAVIGLGRFGSAICRTLHELGHEVLGIDHDHEVVNAALESGALSHGLS 68

Query: 158 GDATHDEYLIDAQIDRAKALISTVSTDSDNVYITLSSKRLNPKLYVVSKADEQVAMDKLL 217
            D T    L +A +     +I  + +  +   IT  + +     +V+SKA   V    L 
Sbjct: 69  LDTTDYSALQEAGVLEFDVVIVAIGSYIEASIITTLNLKEGKVPHVISKASTSVHGKLLE 128

Query: 218 IAGADKVVSPYMIGGLRVAELAMKPGILDFVSTFMSIAKYEYDEDLEIRKILIGKNSKIR 277
             GAD V+ P    G ++A     P +L         A+++   D  + ++ +   S   
Sbjct: 129 RVGADLVIFPEDEMGAQLARSLTAPAVL---------ARFDLSPDHSLVEVHV--PSPFI 177

Query: 278 GKTLTESQIRYNSGVTIIGIKKENDLLVNPGPEIILEYNDQIYAFGTGEQLDVL 331
           G++L++  +R    VT++ I++  +L+VNP P+  L   D +   G  + L  L
Sbjct: 178 GQSLSQLALRSRYNVTLLAIQRGEELIVNPHPDTELAEADALIVVGENQALSQL 231