Pairwise Alignments

Query, 335 a.a., potassium channel protein from Methanococcus maripaludis S2

Subject, 384 a.a., response regulator receiver domain protein (CheY-like) from Synechococcus elongatus PCC 7942

 Score =  163 bits (412), Expect = 7e-45
 Identities = 98/327 (29%), Positives = 178/327 (54%), Gaps = 10/327 (3%)

Query: 3   SMEKIKIGIFVLFVVIISFSLMFMYIEGWTLLQAIYFSVATISTVGYGDFYPTSELG-QL 61
           ++ K+ IG  + F+   + +++  ++ GW+LL AIY  V TI  VGYG+  P +    ++
Sbjct: 35  ALRKVVIG-GLFFLATQAIAILGYWLSGWSLLDAIYMVVITIFGVGYGEVRPINTPALRI 93

Query: 62  LTILFIVFGVSTGLYTLGAFAESFIGGYFKRYNRRIKMKKRIEMLENHYIVCGYGRIGRV 121
            TI  I+ G S+ +Y +G  A+    G  +R     +M + I  L+ H IVCG+GRIG+ 
Sbjct: 94  FTIFVILAGTSSAVYLIGGLAQLVTEGEIRRALGVRRMTREIRTLQRHVIVCGFGRIGQT 153

Query: 122 VIDRLRESGLDYVAIDNN-SEILQAEFEKDPNFNYIVGDATHDEYLIDAQIDRAKALIST 180
           +  ++ E+ L  + ID + + I QAE   +  F  + G AT +  LIDA ++RA  + + 
Sbjct: 154 LARKVTEASLPVIVIDTDETRIRQAE---EQGFLALRGSATDEAILIDAGVERAATIATA 210

Query: 181 VSTDSDNVYITLSSKRLNPKLYVVSKADEQVAMDKLLIAGADKVVSPYMIGGLRVAELAM 240
           +  D+ NV+ITL+++ LNP L ++++ +      KLL AGAD+VV P  IG LR+A L  
Sbjct: 211 LPDDAANVFITLTARGLNPNLTIIARGELPATEKKLLQAGADRVVLPATIGALRMAHLIT 270

Query: 241 KPGILDFV---STFMSIAKYEYDEDLEIRKILIGKNSKIRGKTLTESQIRYNSGVTIIGI 297
            P  L+ +    +  ++ +   + D+++ ++ I   S + G  L   ++       I+ +
Sbjct: 271 HPAALNLLESSDSHQTLNELLGELDIQMDELAIAPQSPLIGHRLGAIEVSGKGAFIIVAL 330

Query: 298 KK-ENDLLVNPGPEIILEYNDQIYAFG 323
           ++   ++++ PG ++ L   D +   G
Sbjct: 331 RRATGEMILRPGSDLFLHAGDTLIVIG 357