Pairwise Alignments

Query, 335 a.a., potassium channel protein from Methanococcus maripaludis S2

Subject, 275 a.a., Ion transport protein (RefSeq) from Shewanella loihica PV-4

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 1   MESMEKIKIGIFVLFVVIISFSLMFMYIEG-----WTLLQAIYFSVATISTVGYGDFYPT 55
           M+S  K+ +  F + ++++  S +   +EG      ++ ++IY+++ TI+TVGYGD  P 
Sbjct: 147 MQSSRKVFLFFFSVSLIVMVLSAIMYVVEGPEHGFTSMPKSIYWTIVTITTVGYGDITPQ 206

Query: 56  SELGQLLTILFIVFGVS-----TGLYTLGAFAESFIGGYFKRYNRRIKMKKRIEML 106
           + LGQ +  L ++ G S     TG+ T     E       +R +  +KM   +  L
Sbjct: 207 TTLGQGIAALTMLIGYSIIAIPTGILTSEISQEMVRKKDLRRCSNCLKMGHEVSAL 262