Pairwise Alignments

Query, 335 a.a., potassium channel protein from Methanococcus maripaludis S2

Subject, 347 a.a., potassium channel protein from Caulobacter crescentus NA1000

 Score =  136 bits (342), Expect = 9e-37
 Identities = 84/300 (28%), Positives = 160/300 (53%), Gaps = 13/300 (4%)

Query: 13  VLFVVIISFSLMFMYIE-GWTLLQAIYFSVATISTVGYGDFYP--TSELGQLLTILFIVF 69
           V FV+ ++   +  Y+  GW+   A+Y    TI TVGYG+  P  T +L + +T+  +VF
Sbjct: 23  VAFVLAVAGMAVLAYMRAGWSFGDALYMVTLTIFTVGYGEVRPVDTDDL-RAVTMATMVF 81

Query: 70  GVSTGLYTLGAFAESFIGGYFKRYNRRIKMKKRIEMLENHYIVCGYGRIGRVVIDRLRES 129
           G +  +   GA  ++      +++  + ++++ IE L+ H ++CG+GRIG ++   L  +
Sbjct: 82  GCTGVIIVTGALVQALTQSQLEQFFGK-RVERDIEKLDGHIVICGFGRIGLMLASELAAA 140

Query: 130 GLDYVAIDNNSEILQAEFEKDPNFNYIV--GDATHDEYLIDAQIDRAKALISTVSTDSDN 187
           G  +V ++ +    +A  ++     Y+    DAT ++ L    ++RAK L + +  D+ N
Sbjct: 141 GERFVVVERD----EARCDEARELGYLCRHADATDEDVLRAMHVERAKVLATVLPDDAAN 196

Query: 188 VYITLSSKRLNPKLYVVSKADEQVAMDKLLIAGADKVVSPYMIGGLRVAELAMKPGILDF 247
           V+ITLS++ LNPK+ ++++ +      KL+ AGADKVV P  IG  R+AE+ + P +  F
Sbjct: 197 VFITLSARSLNPKIEIIARGERPTTERKLIQAGADKVVMPAHIGAERIAEMILYPRLAGF 256

Query: 248 VSTFMSIAKYEYD--EDLEIRKILIGKNSKIRGKTLTESQIRYNSGVTIIGIKKENDLLV 305
           +    + A  + +    L +   L+   +    + +T  +     GV ++ I++ N  L+
Sbjct: 257 LKEARAPAAQQSEALAQLGLDLGLVTAPASFAARRVTVGEFERRGGVLVVRIERANGALI 316