Pairwise Alignments

Query, 371 a.a., AAA family ATPase from Methanococcus maripaludis S2

Subject, 630 a.a., FtsH peptidase homologue, chloroplast. Metallo peptidase. MEROPS family M41 from Synechococcus elongatus PCC 7942

 Score =  155 bits (393), Expect = 2e-42
 Identities = 90/252 (35%), Positives = 145/252 (57%), Gaps = 10/252 (3%)

Query: 125 FEEVVGQIDAKKKCKIVIKYLENPELF---GEWAPKNILFYGPPGTGKTMLARALATETD 181
           F++V G  +AK++ + V+ +L+N E F   G   PK +L  GPPGTGKT+LA+A+A E  
Sbjct: 173 FDDVAGIEEAKEELQEVVTFLKNSERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAG 232

Query: 182 VPLYLIKATELIGDHVGDGSKQIESLYENASENTPSIIFIDELDAIALSRQFQSLRG--D 239
           VP + I  +E +   VG G+ ++  L++ A EN P I+FIDE+DA+   R      G  +
Sbjct: 233 VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFIDEIDAVGRQRGAGIGGGNDE 292

Query: 240 VSEVVNALLTELDGIKNNLGVVTIAATNNPEMLDNAIR--SRFEEEIEFKMPDDNERLKI 297
             + +N LLTE+DG + N G++ IAATN P++LD A+    RF+ +I    PD   RL+I
Sbjct: 293 REQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDAALTRPGRFDRQIIVDAPDIKGRLEI 352

Query: 298 LELYAEKMPIAVNADLKKYVEKTKGMNGRTIKEKFLKPALHKAILEDRESITQKDLDEII 357
           L+++A    +A +  L     +T G  G  +     + A+  A    +++IT  ++D+ +
Sbjct: 353 LKVHARNKKLAEDVSLDVIARRTPGFAGADLANLLNEAAILTA-RRRKDAITLTEIDDAV 411

Query: 358 KKIV--KNSTPL 367
            ++V     TPL
Sbjct: 412 DRVVAGMEGTPL 423