Pairwise Alignments

Query, 389 a.a., tRNA pseudouridine(13) synthase TruD from Methanococcus maripaludis S2

Subject, 352 a.a., tRNA pseudouridine 13 synthase (EC 4.2.1.-) from Pseudomonas fluorescens FW300-N2E2

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 6/144 (4%)

Query: 8   EDFIVNEILEYELNDYGNYFLYKLQKNGIENLKAISYLSKNFEVPTKEIGYCGLKDRHAI 67
           EDF V+E+L+  L   G +    ++K G+   +A   ++K   VP + + Y GLKDR A+
Sbjct: 26  EDFQVDEVLDIPLTGDGEHLWIWVEKRGLNTEEAARRIAKAAGVPLRTVSYAGLKDRQAL 85

Query: 68  TTQYVSIPKEYGKLSLD-----EDNLKLEYVGTIEKPLKIGRLYGNRFEIIARAVDKDEF 122
           T Q+ SI    GK   D      D LK+       + L+ G    N F +     + D  
Sbjct: 86  TRQWFSIQLP-GKADPDLSAAENDTLKILKTARHRRKLQRGAHSANGFTLRLTQFNGDTT 144

Query: 123 LKIADNIRNLSSGAPNYYDDQRFG 146
              A   + +  G PNY+  QRFG
Sbjct: 145 AIDARLQQIVRQGIPNYFGAQRFG 168