Pairwise Alignments

Query, 389 a.a., tRNA pseudouridine(13) synthase TruD from Methanococcus maripaludis S2

Subject, 352 a.a., pseudouridine synthase from Pseudomonas fluorescens FW300-N2E3

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 10/146 (6%)

Query: 8   EDFIVNEILEYELNDYGNYFLYKLQKNGIENLKAISYLSKNFEVPTKEIGYCGLKDRHAI 67
           EDF V+E+L+  L   G +    ++K G+   +A   ++K   VP + + Y GLKDR A+
Sbjct: 26  EDFQVDEVLDIPLTGEGEHLWIWVEKRGLNTEEAARRIAKAAGVPLRTVSYAGLKDRQAL 85

Query: 68  TTQYVSIPKEYGKLSLD-----EDNLKLEYVGTIEKPLKIGRLYGNRF--EIIARAVDKD 120
           T Q+ S+    GK   D      D LK+      ++ L+ G    N F   +   A DKD
Sbjct: 86  TRQWFSVQLP-GKADPDLSAAENDTLKILKTARHKRKLQRGAHSANGFTLRLTQFAGDKD 144

Query: 121 EFLKIADNIRNLSSGAPNYYDDQRFG 146
                   I     G PNY+  QRFG
Sbjct: 145 AIDARLQLI--AKQGIPNYFGAQRFG 168