Pairwise Alignments

Query, 389 a.a., tRNA pseudouridine(13) synthase TruD from Methanococcus maripaludis S2

Subject, 346 a.a., Uncharacterized conserved protein from Pseudomonas stutzeri RCH2

 Score = 61.6 bits (148), Expect = 3e-14
 Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 4/143 (2%)

Query: 8   EDFIVNEILEYELNDYGNYFLYKLQKNGIENLKAISYLSKNFEVPTKEIGYCGLKDRHAI 67
           EDF V+E+L+  L+  G +    ++K  +   +A   +++   VP K I Y GLKDR A+
Sbjct: 26  EDFQVDEVLDIPLSGEGEHLWLWVEKRNLNTEEAAKRIARAAGVPLKMISYAGLKDRQAL 85

Query: 68  TTQYVSI----PKEYGKLSLDEDNLKLEYVGTIEKPLKIGRLYGNRFEIIARAVDKDEFL 123
           T Q+ S+      +    + + D L +      ++ L+ G    N F +  RA+  +   
Sbjct: 86  TRQWFSLHLPGKADPDLAAAESDGLAILKRTRHQRKLQRGAHSANGFRLRLRALQGEHAA 145

Query: 124 KIADNIRNLSSGAPNYYDDQRFG 146
             A   R   +G PNY+  QRFG
Sbjct: 146 LDARLQRIKVNGVPNYFGLQRFG 168