Pairwise Alignments

Query, 389 a.a., tRNA pseudouridine(13) synthase TruD from Methanococcus maripaludis S2

Subject, 361 a.a., tRNA pseudouridine(13) synthase TruD from Vibrio cholerae E7946 ATCC 55056

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 9/152 (5%)

Query: 2   KFRQKHEDFIVNEILEYELNDYGNYFLYKLQKNGIENLKAISYLSKNFEVPTKEIGYCGL 61
           K +   E F VNE+L Y L  +G + + +++K G       + L+K   VP++ + + GL
Sbjct: 20  KLKALPEHFQVNEVLGYSLTGHGEHLMVRIRKTGENTSFVANELAKACGVPSRAVSWAGL 79

Query: 62  KDRHAITTQYVSI------PKEYGKLSLDEDNLKLEYVGTIEKPLKIGRLYGNRFEI-IA 114
           KDRHA+T Q++S+        ++        ++++  V   +K L+ G L GN F + ++
Sbjct: 80  KDRHAVTEQWLSVHLPNGETPDFSAFLAQYPSIEILEVTRHDKKLRPGDLQGNEFVVTLS 139

Query: 115 RAVDKDEFLKIADNIRNLSSGAPNYYDDQRFG 146
              D    L   + +  L  G PNY+  QRFG
Sbjct: 140 EVSDVAAVLSRLETVAEL--GVPNYFGSQRFG 169