Pairwise Alignments

Query, 355 a.a., DNA cytosine methyltransferase from Methanococcus maripaludis S2

Subject, 389 a.a., DNA cytosine methyltransferase M.NgoMIII from Pseudomonas fluorescens FW300-N2E2

 Score = 50.4 bits (119), Expect = 8e-11
 Identities = 90/437 (20%), Positives = 145/437 (33%), Gaps = 144/437 (32%)

Query: 1   MNFIDLFCGCGGFSRGFVEMGFKPLLAIELDENAANSYALNYNGTVFEKKLNDILEKDVY 60
           M+ I+LF G GG + G    GF+    IE +++A  +   N    V              
Sbjct: 1   MSSIELFAGAGGLAMGMTRAGFQHSAVIEWNDDACQTIRDNQAHYVEAG----------- 49

Query: 61  FKLEDFLVQDDIEEFKKSNNYENLNPVVINEDIREINSKYITNKIKDTSYSK-IDVIIGG 119
              +DFL+            YE         D R  +          T Y+  ++VI GG
Sbjct: 50  ---QDFLL------------YEG--------DARTFDF---------TPYAGGVEVISGG 77

Query: 120 PPCEGYT----GANPKRERSPFNRLYRDPVGRLVLDYIRIVGDISPEVFVMENVPGILNY 175
           PPC+ ++     A    ER  F               ++ V +  P  F+ ENV G+L  
Sbjct: 78  PPCQPFSLGGKHAGNLDERDMFPTA------------VQAVRETKPRAFIFENVKGLLRQ 125

Query: 176 ETRENIEKEFSRAGYDEL------------------------------YFHVFDSENYGN 205
                 E  + +  Y E+                               F + ++ +YG 
Sbjct: 126 SFASYFEYVYLQLSYPEIARRHGETWTEHLSRLEGLHTSGKVKPTYHVVFRLLNAADYGV 185

Query: 206 PSFRKRVIILNIPLNL-------EKTDNVDVKTALSNI-----DRNALNNEKYPLP-EKI 252
           P  R+RV ++    +L       E T + D       +     + + + +   P P EK+
Sbjct: 186 PQKRERVFLVGFRADLGIQWSFPEPTHSEDELLISKWVTGTYWEEHRIRSRGRPRPPEKL 245

Query: 253 AKSI---------------------------------------HKIKIGGSAVKFKACGG 273
           AK I                                       H    G  +      G 
Sbjct: 246 AKRISLLAASLETRARLRRWTTVRDAIAGLPDPEQPTLLPVPNHTFNPGARSYPGHT-GS 304

Query: 274 VLDNYIRLSMEGNAETVMGKRRFIHPEED-RLLTVREQARLMSYPDTHIFAGGITAQYNQ 332
            LD   +    GN     G+   +  +   R  TVRE AR+ ++PD ++F G  +    Q
Sbjct: 305 PLDEPAKTLKAGNHGVPGGENMLVRTDGSVRYFTVREAARIQTFPDDYVFHGSWSDTMKQ 364

Query: 333 VGESVPPSLSLAIAKEV 349
           +G +VP  L+  +A  V
Sbjct: 365 LGNAVPVRLAEVVASSV 381